SRR937304_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937304_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	290794
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1371	0.4714677744382621	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1181	0.4061294249537473	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	982	0.337696101019966	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	754	0.2592900816385483	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	333	0.11451405462286016	No Hit
GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGT	308	0.10591690337489769	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACGCG	15	6.615292E-4	94.991394	5
GCCGCGC	65	1.3264513E-4	36.535156	8
GCTCCGT	60	0.0039478904	31.6638	6
GGGCGTA	65	0.00583957	29.228125	9
TCATACC	35	0.008391924	27.140402	68-69
AGGGCGT	95	0.0012249976	24.997736	8
TACATGG	1095	0.0	23.856287	2
TCCTAGA	165	2.4214241E-6	23.02822	2
GTACATG	1125	0.0	22.817554	1
GAGTACT	1270	0.0	22.812895	12-13
TCCTACA	125	2.2516584E-4	22.797935	2
GTGTAGG	105	0.002182516	22.636465	1
CGTCTGC	105	0.0021934588	22.617002	8
TGCATAG	105	0.0021934588	22.617002	5
GTAGATC	105	0.0021934588	22.617002	3
TATACTG	105	0.0021934588	22.617002	5
AGAGTAC	1835	0.0	22.518396	10-11
AGTACTT	1335	0.0	22.235815	12-13
ACTGGTC	150	3.0252837E-5	22.16466	8
CCTAGAC	130	2.9359947E-4	21.921093	3