FastQC Report![[OK]](data:image/png;base64,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)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR937293_1.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1157 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 101 |
| %GC | 42 |
![[FAIL]](data:image/png;base64,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)
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 21 | 1.8150388936905792 | No Hit |
| ATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTCTT | 15 | 1.296456352636128 | RNA PCR Primer, Index 33 (95% over 22bp) |
| CTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGT | 12 | 1.0371650821089022 | No Hit |
| ATACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATGCCGTCTT | 12 | 1.0371650821089022 | RNA PCR Primer, Index 23 (95% over 23bp) |
| ATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGTCTT | 12 | 1.0371650821089022 | RNA PCR Primer, Index 31 (95% over 22bp) |
| TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 12 | 1.0371650821089022 | No Hit |
| CTTATACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATGCCGT | 12 | 1.0371650821089022 | No Hit |
| TCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGTCTTCTGCTTG | 11 | 0.9507346585998271 | RNA PCR Primer, Index 31 (96% over 29bp) |
| TCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTCTTCTGCTTG | 11 | 0.9507346585998271 | RNA PCR Primer, Index 33 (96% over 29bp) |
| CTTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGT | 10 | 0.864304235090752 | No Hit |
| CTTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGT | 9 | 0.7778738115816767 | No Hit |
| GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 9 | 0.7778738115816767 | No Hit |
| CTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGT | 8 | 0.6914433880726015 | No Hit |
| ATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCTT | 8 | 0.6914433880726015 | TruSeq Adapter, Index 3 (95% over 21bp) |
| CTTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGT | 7 | 0.6050129645635264 | No Hit |
| GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 7 | 0.6050129645635264 | No Hit |
| TCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATGCCGTCTTCTGCTTG | 7 | 0.6050129645635264 | RNA PCR Primer, Index 23 (96% over 30bp) |
| ACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATGCCGTCTTCT | 6 | 0.5185825410544511 | RNA PCR Primer, Index 23 (96% over 25bp) |
| TTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTC | 6 | 0.5185825410544511 | No Hit |
| ATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGTCTT | 5 | 0.432152117545376 | RNA PCR Primer, Index 27 (95% over 23bp) |
| CTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGT | 5 | 0.432152117545376 | No Hit |
| GTGCTCGCCCACGTCGCTGTCGTAGCGCACGTACTCCTCCCGGTTGTAGA | 5 | 0.432152117545376 | No Hit |
| TCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTCTTCTGCTTG | 5 | 0.432152117545376 | TruSeq Adapter, Index 1 (96% over 28bp) |
| ATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTCTT | 5 | 0.432152117545376 | TruSeq Adapter, Index 1 (95% over 21bp) |
| TCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTTCTGCTTG | 4 | 0.34572169403630076 | RNA PCR Primer, Index 39 (96% over 30bp) |
| TTATACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATGCCGTC | 4 | 0.34572169403630076 | No Hit |
| CATCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATGCCGTCTTCTGCT | 4 | 0.34572169403630076 | RNA PCR Primer, Index 23 (96% over 28bp) |
| ACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGTCTTCT | 4 | 0.34572169403630076 | RNA PCR Primer, Index 27 (96% over 25bp) |
| CTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTCTTCTGCTTGA | 4 | 0.34572169403630076 | RNA PCR Primer, Index 33 (96% over 29bp) |
| GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 4 | 0.34572169403630076 | No Hit |
| TGCTTACACCACATGAAACACTGTCTCTTCTATAGGATCATTTATTTCAC | 4 | 0.34572169403630076 | No Hit |
| CATCATGATCTTTATAATTTGAGAGGCCTTTGCTTCAAAACGAGAAGTAA | 4 | 0.34572169403630076 | No Hit |
| CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGT | 4 | 0.34572169403630076 | No Hit |
| GTCCTAGACTGTGGTAGAGTCCATGATTGAGGTTCCTGGGACATTCCCAG | 4 | 0.34572169403630076 | No Hit |
| ATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGTCTT | 3 | 0.25929127052722556 | TruSeq Adapter, Index 11 (95% over 21bp) |
| CAGCTGTTCTCATCATGATCTTTATAATTTGAGAGGCCTTTGCTTCAAAA | 3 | 0.25929127052722556 | No Hit |
| CTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTTCTGCTTGA | 3 | 0.25929127052722556 | RNA PCR Primer, Index 39 (96% over 30bp) |
| ACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGTCTTCT | 3 | 0.25929127052722556 | RNA PCR Primer, Index 31 (95% over 24bp) |
| GTGTTTGCTATCATAGCAGGATTTGTTCACTGATTCCCATTATTTTCAGG | 3 | 0.25929127052722556 | No Hit |
| GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 3 | 0.25929127052722556 | No Hit |
| CACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATGCCGTCTTCTG | 3 | 0.25929127052722556 | Illumina PCR Primer Index 1 (95% over 23bp) |
| ATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTT | 3 | 0.25929127052722556 | RNA PCR Primer, Index 39 (95% over 23bp) |
| CTTATACACATCTCCGAGCCCACGAGACTCCTGAGCATCTCGTATGCCGT | 3 | 0.25929127052722556 | No Hit |
| TATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGTCT | 3 | 0.25929127052722556 | RNA PCR Primer, Index 31 (95% over 21bp) |
| ACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCTTCT | 3 | 0.25929127052722556 | RNA PCR Primer, Index 3 (95% over 23bp) |
| ATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTT | 3 | 0.25929127052722556 | RNA PCR Primer, Index 46 (95% over 21bp) |
| TATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGTCT | 3 | 0.25929127052722556 | No Hit |
| CATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTCTTCTGCT | 3 | 0.25929127052722556 | RNA PCR Primer, Index 33 (96% over 27bp) |
| TCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGTCTTCTGCTTG | 3 | 0.25929127052722556 | RNA PCR Primer, Index 27 (96% over 30bp) |
| ATACACATCTCCGAGCCCACGAGACCAGAGAGGATATCGTATGCCGTCTT | 2 | 0.17286084701815038 | No Hit |
| ACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTTCT | 2 | 0.17286084701815038 | RNA PCR Primer, Index 46 (95% over 23bp) |
| GAGATGTGTATAAGAGACAGACACATCTCCGAGCCCACGAGACAAGAGGC | 2 | 0.17286084701815038 | No Hit |
| ACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTCTTCT | 2 | 0.17286084701815038 | RNA PCR Primer, Index 1 (95% over 23bp) |
| ACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTCTTCT | 2 | 0.17286084701815038 | RNA PCR Primer, Index 33 (95% over 24bp) |
| CATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGTCTTCTGCT | 2 | 0.17286084701815038 | RNA PCR Primer, Index 31 (96% over 27bp) |
| TTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGTC | 2 | 0.17286084701815038 | No Hit |
| TTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGTC | 2 | 0.17286084701815038 | No Hit |
| TCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGTCTTCTGCTTGAA | 2 | 0.17286084701815038 | RNA PCR Primer, Index 38 (96% over 28bp) |
| TCTCCGAGCCCACGAGACTCCTGAGCATCTCGTATGCCGTCTTCTGCTTG | 2 | 0.17286084701815038 | RNA PCR Primer, Index 26 (100% over 29bp) |
| TATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGTCT | 2 | 0.17286084701815038 | RNA PCR Primer, Index 27 (95% over 22bp) |
| GAATAACCCTGGTCGGTTTGATGTTACTGTTGCTTGATTTAGTCGGCCTG | 2 | 0.17286084701815038 | No Hit |
| TATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTCT | 2 | 0.17286084701815038 | No Hit |
| CCCATGTACTCTGCGTTGATACCACCTGTCTCTTATACACATCTCCGAGC | 2 | 0.17286084701815038 | No Hit |
| CACATCTCCGAGCCCACGAGACTCCTGAGCATCTCGTATGCCGTCTTCTG | 2 | 0.17286084701815038 | RNA PCR Primer, Index 26 (96% over 27bp) |
| TATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCT | 2 | 0.17286084701815038 | No Hit |
| CTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCTTCTGCTTGA | 2 | 0.17286084701815038 | RNA PCR Primer, Index 3 (96% over 28bp) |
| CATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTTCTGCT | 2 | 0.17286084701815038 | RNA PCR Primer, Index 39 (96% over 28bp) |
| CATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTCTTCTGCT | 2 | 0.17286084701815038 | TruSeq Adapter, Index 1 (96% over 26bp) |
| GCTTACACCACATGAAACACTGTCTCTTCTATAGGATCATTTATTTCACT | 2 | 0.17286084701815038 | No Hit |
| CTTTACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTC | 2 | 0.17286084701815038 | No Hit |
Adapter Content
Kmer Content
No overrepresented Kmers