Basic Statistics
Measure | Value |
---|---|
Filename | SRR937206_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1375981 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 6833 | 0.4965911593256012 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 5329 | 0.3872873244616023 | No Hit |
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT | 4769 | 0.3465890880760708 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 3710 | 0.2696258160541461 | No Hit |
GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT | 2136 | 0.15523470164195582 | No Hit |
GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGT | 2104 | 0.15290908813421117 | No Hit |
CTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGC | 1593 | 0.11577194743241367 | No Hit |
GTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTAT | 1553 | 0.11286493054773286 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACATG | 6050 | 0.0 | 24.035872 | 1 |
TACATGG | 6015 | 0.0 | 23.453596 | 2 |
TATAGGG | 340 | 0.0 | 22.352684 | 2 |
AACGCGA | 75 | 3.036318E-5 | 22.165607 | 76-77 |
ACATGGG | 6030 | 0.0 | 21.97736 | 3 |
GTATCAA | 11660 | 0.0 | 21.967672 | 1 |
GAGTACT | 6190 | 0.0 | 20.567434 | 12-13 |
AGAGTAC | 9455 | 0.0 | 20.549334 | 10-11 |
AGTACTT | 6385 | 0.0 | 20.4601 | 12-13 |
ACGCGAA | 70 | 4.8556674E-4 | 20.35617 | 78-79 |
TAACGCG | 70 | 4.8556674E-4 | 20.35617 | 76-77 |
GTACTTT | 6375 | 0.0 | 19.781406 | 14-15 |
CATGGGA | 3945 | 0.0 | 19.385075 | 4 |
TCAACGC | 13490 | 0.0 | 18.837812 | 4 |
AGTACAT | 4565 | 0.0 | 18.8333 | 2 |
GGTATCA | 9125 | 0.0 | 18.800447 | 1 |
CAACGCA | 13520 | 0.0 | 18.796013 | 5 |
ATCAACG | 13590 | 0.0 | 18.699196 | 3 |
AACGCAG | 13815 | 0.0 | 18.462744 | 6 |
TATCAAC | 13775 | 0.0 | 18.413582 | 2 |