SRR937188_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937188_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1162852
Sequences flagged as poor quality	0
Sequence length	101
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10998	0.9457781385765341	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7839	0.6741184604747638	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5988	0.5149408523182658	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2227	0.19151190349244787	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1738	0.14946012046244922	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1674	0.14395641061803222	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	1670	0.14361242875275618	No Hit
GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT	1360	0.1169538341938613	No Hit
GATATAGGCTTACTAGGAGGGTGAATACGTAGGCTTGAATTAATGCTACT	1356	0.11660985232858523	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	1204	0.10353854144809485	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	4635	0.0	40.0808	1
CATTCCG	305	0.0	35.82458	9
GTATCAA	7570	0.0	35.58742	1
ATCAACG	9290	0.0	28.842657	3
TCAACGC	9335	0.0	28.704857	4
CAACGCA	9500	0.0	28.207516	5
TATCAAC	9655	0.0	27.850695	2
AACGCAG	9705	0.0	27.708405	6
GCGCACT	35	0.008398281	27.139557	86-87
CGCCGCA	35	0.008398281	27.139557	86-87
GTACATG	5780	0.0	27.126606	1
TAGGCAT	480	0.0	26.725872	5
ACATGGG	5840	0.0	25.055885	3
TACATGG	6180	0.0	24.984276	2
CGCAGAG	10735	0.0	24.917068	8
ACGCAGA	10705	0.0	24.897058	7
CATGGGA	3635	0.0	24.310793	4
GTGTACG	100	0.001651092	23.756329	1
TTCGAGA	100	0.0016519212	23.754278	2
GAGTACT	6365	0.0	23.584305	12-13