SRR937180_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937180_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	429573
Sequences flagged as poor quality	0
Sequence length	101
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7773	1.8094712656521708	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6568	1.5289601534547097	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4842	1.127165813493865	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2191	0.5100413666594502	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1312	0.30541956780337687	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1262	0.2937801025669677	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	837	0.19484464805748963	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	661	0.15387373042532934	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	610	0.14200147588419196	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	555	0.12919806412414186	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	3350	0.0	44.69748	1
GTATCAA	5700	0.0	37.778145	1
ATAACGC	55	0.0025787181	34.54304	3
ACGCAGT	60	0.0039450717	31.671827	8
ATCAACG	7355	0.0	29.382719	3
ACCTAAT	65	0.005818816	29.252565	1
GTAGACT	65	0.0058420445	29.22873	4
TATCAAC	7410	0.0	29.036434	2
TCAACGC	7450	0.0	29.00804	4
CAACGCA	7545	0.0	28.642797	5
AACGCAG	7695	0.0	28.084457	6
TCTAGAC	120	5.374308E-6	27.706398	3
ACGCAGG	105	6.888287E-5	27.147282	8
GACGTGA	105	6.888287E-5	27.147282	7
TGAACCG	70	0.00838868	27.140963	5
GTATACA	130	9.944333E-6	25.595993	1
ACGCAGA	8555	0.0	25.21159	7
CGCAGAG	8595	0.0	24.983711	8
GTACATG	4455	0.0	24.968098	1
CATGGGT	310	0.0	24.514416	4