SRR937169_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937169_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	224560
Sequences flagged as poor quality	0
Sequence length	101
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3114	1.3867117919486998	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2585	1.1511400071250444	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2015	0.8973102956893482	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1291	0.5749020306376915	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	567	0.2524937655860349	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	528	0.23512646954043462	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	418	0.1861417883861774	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	279	0.12424296401852511	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	263	0.11711791948699679	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	254	0.11311008193801211	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCAGT	20	0.0020721287	71.248	8
GGTATCA	1105	0.0	64.47782	1
ATCACGC	30	1.2991368E-4	63.331554	3
TATCACG	25	0.0050165886	56.998394	2
CACGCAG	45	1.512282E-5	52.77629	5
TCACGCA	40	5.3796126E-4	47.498665	4
GTATCAA	2055	0.0	42.066944	1
GGTACTC	50	0.001613271	37.998928	3
GTATCAC	50	0.001613271	37.998928	1
GTATAGT	50	0.001613271	37.998928	1
TAAGGTG	50	0.001613271	37.998928	5
GTGGTAC	50	0.001613271	37.998928	1
TGGTATC	390	0.0	37.75535	2
GTGGTAT	430	0.0	34.24322	1
TATCAAC	2770	0.0	31.037035	2
ATCAACG	2845	0.0	30.218834	3
TCAACGC	2870	0.0	29.955605	4
CAACGCA	2925	0.0	29.392336	5
AACGCAG	3015	0.0	28.514954	6
GCGCTTG	35	0.008387373	27.142096	68-69