SRR937168_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937168_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	363473
Sequences flagged as poor quality	0
Sequence length	101
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5197	1.42981734544244	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4275	1.176153386909069	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3207	0.8823213828812595	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1463	0.40250582574221466	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	962	0.26466890250445013	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	874	0.2404580257680763	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	564	0.15516970999221402	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	431	0.11857827128837631	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	404	0.11114993410789797	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1405	0.0	65.640335	1
GTATCAA	2900	0.0	48.522045	1
CGGGTCG	40	5.380059E-4	47.505775	5
TATCAAC	4045	0.0	34.998077	2
GTCGGGA	55	0.0025757772	34.549656	8
ATCAACG	4060	0.0	34.517746	3
GGCCCGC	70	2.0491141E-4	33.9327	9
TCAACGC	4135	0.0	33.89167	4
GTGGTAT	515	0.0	33.230785	1
CAACGCA	4230	0.0	33.13051	5
TGGTATC	520	0.0	32.88862	2
AACGCAG	4330	0.0	32.356464	6
CTAGACA	75	3.0721427E-4	31.67052	4
GGTCGGG	60	0.0039450773	31.670519	7
TGCGGGA	30	0.003952974	31.661808	46-47
ACGAATC	40	4.496074E-4	29.682941	72-73
TCTAGAC	65	0.0058354135	29.234325	3
ACGCAGA	5085	0.0	27.279623	7
CGCAGAG	5075	0.0	27.239767	8
CACTAGG	70	0.008351086	27.164852	1