SRR937166_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR937166_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	325270
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1980	0.608725059181603	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1792	0.5509269222492084	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1166	0.3584714237402773	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	672	0.20659759584345314	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	619	0.1903034402188951	No Hit
GTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGA	477	0.14664740062102255	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	451	0.1386540412580318	No Hit
TCCATGCCCTGAGTCCACCCCGGGGAAGGTGACAGCATTGCTTCTGTGTA	370	0.11375165247332986	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	345	0.10606573000891567	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCACCG	35	2.7832057E-4	54.292656	5
GGTATCA	1140	0.0	47.118336	1
GTATCAA	1905	0.0	37.429375	1
GTAAGGT	180	0.0	36.94917	4
GGTAAGG	200	0.0	35.62956	3
AGGTAAG	205	0.0	32.443172	2
ACCGAGT	75	3.074099E-4	31.665846	8
GTATAGG	95	3.465604E-5	30.022299	1
ATCAACG	2405	0.0	29.629568	3
TATCAAC	2410	0.0	29.568094	2
TAAGGTG	275	0.0	29.367388	5
TCAACGC	2435	0.0	29.26452	4
GTACCTA	65	0.0058343466	29.234507	5
CAACGCA	2460	0.0	28.96712	5
AACGCAG	2510	0.0	28.574957	6
GTAGATC	150	3.317109E-8	28.503643	3
CTTATAG	85	6.392446E-4	27.94475	3
AAAGGCG	85	6.392446E-4	27.94475	5
GGTGTGC	275	0.0	27.635647	8
ACGCAGA	2765	0.0	25.596083	7