Basic Statistics
Measure | Value |
---|---|
Filename | SRR937059_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2426084 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 8701 | 0.3586438062325954 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 5712 | 0.2354411471325807 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 3989 | 0.1644213473235057 | No Hit |
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT | 3183 | 0.13119908461537194 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 11615 | 0.0 | 30.814854 | 1 |
GGTATCA | 7865 | 0.0 | 28.52513 | 1 |
GTACATG | 10105 | 0.0 | 26.200119 | 1 |
TACATGG | 9970 | 0.0 | 25.793152 | 2 |
ATCAACG | 14045 | 0.0 | 25.312109 | 3 |
TCAACGC | 14070 | 0.0 | 25.200617 | 4 |
CAACGCA | 14140 | 0.0 | 25.141012 | 5 |
TATCAAC | 14190 | 0.0 | 25.090061 | 2 |
AACGCAG | 14615 | 0.0 | 24.323908 | 6 |
ACATGGG | 10350 | 0.0 | 23.603222 | 3 |
ACGCAGA | 16280 | 0.0 | 21.602692 | 7 |
CGCAGAG | 16260 | 0.0 | 21.600481 | 8 |
CATGGGG | 5375 | 0.0 | 21.222631 | 4 |
GAGTACT | 7745 | 0.0 | 20.856653 | 12-13 |
GTGTAGC | 1435 | 0.0 | 20.536392 | 1 |
AGAGTAC | 12780 | 0.0 | 20.395367 | 10-11 |
AGTACTT | 8160 | 0.0 | 19.912374 | 12-13 |
GCAGAGT | 17310 | 0.0 | 19.7411 | 9 |
GTACTTT | 8260 | 0.0 | 19.325994 | 14-15 |
TAGCCCT | 1535 | 0.0 | 18.268803 | 4 |