SRR936652_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936652_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1196130
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7250	0.6061214082081379	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6416	0.536396545525988	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3862	0.32287460393101086	No Hit
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	2553	0.21343833864212086	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	2031	0.1697975972511349	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	1784	0.14914766789563008	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	1642	0.1372760485900362	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1552	0.12975178283296968	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	1379	0.11528847198883063	No Hit
GTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGA	1204	0.10065795523897904	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGTAAG	610	43.60786	2
GTAAGGT	745	39.524773	4
GGTAAGG	735	38.775047	3
TAAGGTG	820	37.647266	5
TAAGGTA	285	33.328754	4
AAGGTGT	1050	30.304096	6
GTATCAA	11190	29.97463	1
GGTATCA	7655	29.107634	1
GGTGTGC	1085	28.888832	8
AGGTGTG	1085	28.451124	7
TATAGGG	470	28.298717	2
GTATAGG	675	27.449858	1
GTGTGCA	1165	26.4974	9
GTACATG	8435	25.34584	1
GTATAGT	345	24.787495	1
ATCAACG	13650	24.428282	3
TACATGG	8685	24.283972	2
TCAACGC	13740	24.265226	4
ACATGGG	8295	23.993084	3
CAACGCA	13950	23.933989	5