SRR936545_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936545_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	349224
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT	1195	0.3421872494444826	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1016	0.290930749318489	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	981	0.28090852862346233	No Hit
GTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGA	635	0.18183171832405562	No Hit
AAGGTAAGGTGTGCACTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCC	623	0.17839552837147504	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	530	0.15176505623897557	No Hit
CCTCAACACCTCAACCCCCTCCCAGGGAGACCAAAGCCTTCATACATCAA	471	0.13487045563878772	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATACGT	25	0.005018926	56.998367	6
ACCGTGC	50	2.8233992E-5	47.49864	8
GTATACC	55	0.0025775384	34.544468	3
TAAGGTG	260	0.0	32.883675	5
GGTAAGG	225	0.0	29.554708	3
TACCGTG	65	0.005839393	29.229933	7
AGGTAAG	230	0.0	28.912214	2
CCTATTC	85	6.399251E-4	27.940378	3
AGCGTGC	70	0.008384884	27.142078	8
AGGGACG	70	0.008384884	27.142078	5
AAGGTAA	255	0.0	26.085155	1
GTATAGG	130	9.975056E-6	25.583515	1
GTAAGGT	260	0.0	25.57619	4
GGTGTGC	350	0.0	24.427872	8
GTACATG	1175	0.0	23.857212	1
GATTGTA	105	0.002193547	22.6184	9
GGCGACA	130	2.9364042E-4	21.92245	6
GTGTGCA	370	0.0	21.8237	9
ACATGGG	1205	0.0	21.679876	3
GTATAGA	110	0.0028691024	21.596476	1