SRR936354_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936354_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3175139
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	5201	0.16380385236677827	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	4739	0.1492533082803619	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4410	0.13889155718851992	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	3908	0.12308122573531427	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	3848	0.12119154468513031	No Hit
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	3735	0.11763264537395055	No Hit
GTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGA	3251	0.10238921823580006	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	3196	0.1006570106064648	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	3270	50.960384	1
GTATCAA	6175	46.229385	1
ATCAACG	7745	35.991642	3
TCAACGC	7815	35.668697	4
CAACGCA	7980	34.931187	5
TATCAAC	8320	33.50371	2
AACGCAG	8405	33.05019	6
TACATGG	12020	29.411495	2
GTACATG	12685	28.512854	1
ACATGGG	12005	28.26603	3
ACGCAGA	9985	27.773024	7
CGCAGAG	10375	26.639057	8
GAGTACA	8645	24.368723	1
CATGGGG	7675	23.74014	4
GTAAGGT	1285	21.729506	4
TAAGGTG	1535	21.581947	5
GCAGAGT	12775	21.486279	9
AGTACAT	8915	21.446724	2
GTACCTG	2915	20.300617	1
TACCTGG	2735	20.072508	2