SRR936270_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936270_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1608422
Sequences flagged as poor quality	0
Sequence length	125
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14857	0.9237003721660112	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12557	0.7807030741932155	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11671	0.7256180281045645	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3816	0.23725116915834277	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2765	0.17190762125860004	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2610	0.1622708468299986	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2072	0.1288219136520142	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1705	0.10600451871461594	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	6765	89.2853	1
GTATCAA	11305	53.40076	2
GTACATG	14030	42.160076	1
ACATGGG	14150	41.359676	3
TACATGG	14320	41.11813	2
TCAACGC	16050	38.985916	5
CATGGGA	10250	38.974335	4
CAACGCA	16225	38.75785	6
ATCAACG	16235	38.541664	4
AACGCAG	16630	37.81396	7
TATCAAC	16755	37.52317	3
TGGTATC	1765	34.406105	2
ATGGGAG	3375	34.222206	5
GGAACGC	235	32.91129	8
ATGGGAT	4205	32.84748	5
ACGCAGA	19185	32.77801	8
CGCAGAG	19270	32.60255	9
GTGGTAT	1995	30.754177	1
CATGGGG	3370	30.563019	4
TACCTGG	880	29.768026	2