SRR936268_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936268_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2048290
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12248	0.5979622026177933	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9390	0.4584311791787296	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8551	0.41747018244486866	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2444	0.119319041737254	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2230	0.10887130240346825	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	6865	90.50867	1
GTATCAA	10385	59.55468	2
GTACATG	16045	45.593723	1
ATCAACG	14620	43.97271	4
TCAACGC	14600	43.86986	5
TACATGG	16860	43.249928	2
CAACGCA	14840	43.219494	6
ACATGGG	16755	42.739365	3
TATCAAC	15195	42.426247	3
AACGCAG	15175	42.304592	7
CATGGGA	10520	39.551987	4
ATGGGAT	4395	35.756245	5
ACGCAGA	17905	35.654976	8
CATGGGG	5995	35.24894	4
CGCAGAG	18010	35.248894	9
GTGGTAT	1855	29.866577	1
ATGGGGG	3435	29.286455	5
ATGGGAG	3700	29.280369	5
AGTACAT	10665	28.297884	2
GAGTACA	11095	27.866758	1