SRR936267_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936267_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23109
Sequences flagged as poor quality	0
Sequence length	125
%GC	36

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	388	1.6789995239949802	No Hit
AAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	89	0.38513133411225065	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	73	0.3158942403392618	No Hit
AAAAACAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	72	0.31156692197844993	No Hit
GAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	53	0.22934787312302568	No Hit
ACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	50	0.21636591804059024	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	49	0.21203859967977842	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	45	0.19472932623653122	No Hit
AAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	44	0.1904020078757194	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	37	0.16011077935003679	No Hit
AAACAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	35	0.15145614262841317	No Hit
GTTCTAGACCAATCTTTCTCTTGTTTGGTTAGAGTCACAGCAAGCTGAAC	33	0.14280150590678956	No Hit
GAAACAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	33	0.14280150590678956	No Hit
AAAACAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	32	0.13847418754597773	No Hit
AAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	32	0.13847418754597773	No Hit
GTCTAGAACACAGCAGACAGCCCCATGGTCCCCAGAGAAGATACCACTCC	30	0.12981955082435415	No Hit
AAAAACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	29	0.12549223246354235	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28	0.12116491410273054	No Hit
GAAAACAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	27	0.11683759574191872	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAACATA	45	4.118374E-8	79.33333	1
GTACATA	40	1.9208856E-6	74.37501	1
GGAAACA	45	3.8666294E-6	66.11111	1
AACATAA	40	1.7356956E-4	59.500004	2
TCAACAC	60	3.019104E-7	59.5	4
ACAACAC	110	1.8189894E-12	54.090908	5
GAAACAA	70	8.7543594E-7	51.0	2
AACCTCT	35	0.0077004614	51.0	5
ATCAACA	80	2.19729E-6	44.625004	3
AACAACA	180	0.0	42.97222	4
AACACAG	70	5.2872732E-5	42.5	7
GCAGAGA	85	3.3346514E-6	42.0	1
GTACAAA	60	0.00128209	39.666668	1
AGAACAA	75	7.941996E-5	39.666664	2
GAACAAA	105	3.0826413E-7	39.666664	1
GTACATG	280	0.0	38.25	1
AAACAAC	210	0.0	36.833332	3
AACAAAG	65	0.0018998862	36.615383	9
TACATAA	65	0.0018998862	36.615383	2
GAGAACA	130	3.9062797E-8	36.615383	1