SRR936266_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936266_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	519716
Sequences flagged as poor quality	0
Sequence length	125
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3523	0.6778702214286264	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	1666	0.32055969029239045	No Hit
AAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1445	0.27803646606993054	No Hit
GAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	893	0.17182461190342418	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	788	0.1516212700782735	No Hit
AAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	656	0.12622278321236985	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	654	0.12583795765379555	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	619	0.11910351037874532	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCAGAA	160	0.0	59.493603	2
GGTATCA	2125	0.0	52.074398	1
GTACATG	8735	0.0	48.562035	1
GTCGGGA	450	0.0	47.59488	2
TACATGG	8685	0.0	46.58106	2
ATGGGAT	2195	0.0	45.263924	5
CGGGAGT	475	0.0	45.08989	4
GAACAAA	1280	0.0	43.690613	1
TCGGGAG	520	0.0	42.331985	3
ACATGGG	8940	0.0	42.058117	3
ACATGGA	740	0.0	41.806313	3
CGTCACT	100	2.2242784E-7	41.64552	1
CATGGGA	6980	0.0	41.082973	4
ATGGGAG	1910	0.0	40.804512	5
GTATCAA	2815	0.0	39.521503	2
TACCTGG	335	0.0	39.070423	2
TACATGA	505	0.0	38.877007	2
GGTCGGG	605	0.0	38.35125	1
GTACATA	470	0.0	37.97464	1
TGGGATA	555	0.0	36.44653	6