SRR936257_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936257_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1410386
Sequences flagged as poor quality	0
Sequence length	125
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14973	1.0616242645630345	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12329	0.8741578546582283	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11537	0.8180030147775148	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3779	0.2679408332187075	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3020	0.2141257783330237	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2613	0.1852684300609904	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2169	0.1537876864914995	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1847	0.13095705714605788	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	1552	0.11004079734200424	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	6965	86.22575	1
ATAACGC	230	56.944706	3
GTATCAA	11555	51.933678	2
TAACGCA	250	50.007805	4
GTACATG	15385	49.026825	1
ACATGGG	15790	47.20421	3
TACATGG	15985	47.149765	2
CATGGGA	11705	45.419098	4
TATAACG	265	44.930637	2
TACCTGG	1290	44.303703	2
GTCGGGA	620	44.169724	2
ATGGGAT	4750	41.35984	5
GGAACGC	320	40.901432	8
ATGGGAG	3610	40.07353	5
CATGGGG	3760	39.108177	4
ATCCACG	235	37.99985	2
ATCAACG	16425	37.91271	4
TCAACGC	16500	37.77646	5
CAACGCA	16695	37.41698	6
GGGAACG	415	37.27272	7