SRR936250_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936250_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1306646
Sequences flagged as poor quality	0
Sequence length	125
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12539	0.9596325248001372	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10596	0.8109311932994859	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10209	0.7813133779156711	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3385	0.2590602198300075	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3087	0.2362537366662432	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2582	0.19760516620415933	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1791	0.13706849445067754	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1564	0.11969577069841411	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1325	0.10140466507378434	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	5970	0.0	77.43054	1
GTACATG	13200	0.0	50.904964	1
TACATGG	13520	0.0	49.275246	2
ACATGGG	13205	0.0	49.188297	3
GTATCAA	9520	0.0	48.403797	2
CATGGGA	9840	0.0	45.438107	4
CATGGGG	3325	0.0	43.331043	4
ATGGGAG	3530	0.0	43.00717	5
ATGGGAT	3975	0.0	40.888477	5
TACCTGG	1020	0.0	37.35556	2
CGGGAGT	385	0.0	37.112988	4
ATCAACG	13280	0.0	36.447514	4
TCAACGC	13455	0.0	35.973465	5
CAACGCA	13490	0.0	35.900894	6
TATCAAC	13730	0.0	35.469757	3
AACGCAG	13700	0.0	35.394016	7
GTCGGGA	410	0.0	33.39792	2
TGGGATA	1180	0.0	33.27781	6
AGTACAT	7860	0.0	32.948994	2
TATCACG	145	1.09228495E-7	32.84713	2