SRR936234_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936234_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2973900
Sequences flagged as poor quality	0
Sequence length	125
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24254	0.8155620565587276	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20773	0.6985103735835099	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20520	0.6900030263290629	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6208	0.20874945357947478	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5319	0.17885604761424392	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5006	0.1683311476512324	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3364	0.11311745519351692	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3166	0.10645953125525405	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	11170	0.0	83.470146	1
GTATCAA	18285	0.0	50.955345	2
GTACATG	25785	0.0	45.793785	1
TACATGG	25985	0.0	45.203777	2
ACATGGG	25770	0.0	44.703022	3
CATGGGA	18500	0.0	40.708878	4
ATGGGAT	7815	0.0	38.090034	5
CATGGGG	7215	0.0	37.956997	4
ATCAACG	26005	0.0	37.568348	4
TCAACGC	26225	0.0	37.29859	5
CAACGCA	26350	0.0	37.18763	6
AACGCAG	26950	0.0	36.359703	7
TATCAAC	26780	0.0	36.303288	3
ATGGGAG	6185	0.0	33.97859	5
ACGCAGA	30535	0.0	31.876516	8
CGCAGAG	30725	0.0	31.582577	9
TACCTGG	2385	0.0	30.703444	2
CCGAGTA	260	1.8189894E-12	29.767365	4
GAGTACA	16605	0.0	29.527794	1
GTCGGGA	835	0.0	29.232618	2