SRR936232_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936232_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1114056
Sequences flagged as poor quality	0
Sequence length	125
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17329	1.5554873363637016	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15809	1.419048952655881	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15713	1.4104317915795974	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4339	0.3894777282291016	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3686	0.33086308049146546	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3516	0.31560352441888023	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2600	0.23338144581600923	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2147	0.19271921698729685	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	1754	0.15744271383126163	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	1152	0.10340593291540102	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	7100	82.80687	1
GTATCAA	11690	50.263943	2
CCGTTGC	180	49.576992	9
GTACATG	10815	43.071278	1
ATGGGAG	2475	42.093662	5
TACATGG	11350	40.964634	2
TATAACG	175	40.822266	2
ACATGGG	11100	40.54644	3
CATGGGA	8370	37.76791	4
GTTATCA	645	36.017406	1
ATCAACG	17080	35.935585	4
TCAACGC	17160	35.76805	5
CATGGGG	2530	35.766544	4
CAACGCA	17425	35.26866	6
ATGGGAT	3135	35.130806	5
TATCAAC	17730	34.685303	3
TACCTGG	825	34.637074	2
AACGCAG	17795	34.53534	7
GTATAAC	305	33.20142	1
TATTCCG	270	33.073593	5