SRR936201_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936201_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4348074
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGG	11304	0.2599771761014187	No Hit
CCTCAGACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGG	9160	0.21066798771134068	No Hit
GGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGACCAAA	7912	0.18196562432010127	No Hit
GACCTGGGCCATTCAGAAATTAAAAACAAAAATGAAGTATTAAGGCGGAA	7771	0.17872280922541797	No Hit
CTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGGGACAAAAAAA	7453	0.17140922624591945	No Hit
GTGTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGA	6082	0.13987802415506267	No Hit
GTACAGGCCAGCCCTGGCTGCCTCAACACCTCAACCCCCTCCCAGGGAGA	5980	0.13753215791635562	No Hit
CCTCAACCCCCTCCCAGGGAGACCAAAGCCTTCATACATCAAGTTGGGGG	5792	0.13320840445677787	No Hit
CTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAA	5410	0.12442290540593376	No Hit
GTATTAAGGCGGAAGATTTAAAAAAATTTTTGCAGTACATAATTTACACA	5315	0.12223802998753011	No Hit
CTTTTATTGGTCTCAAGTCAGTGTACAGGCCAGCCCTGGCTGCCTCAACA	4984	0.11462546405603953	No Hit
GTCCCTCACCCTCCCAAAAGCCACCCCCACTCCTAAGAGGAGGATGGTCG	4686	0.10777185484883653	No Hit
CCCAAAAGCCACCCCCACTCCTAAGAGGAGGATGGTCGCGTCCATGCCCT	4462	0.10262014859912687	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	4185	56.153507	1
TACATGG	18520	51.623825	2
GTACATG	19155	50.96848	1
ACATGGG	19070	49.199005	3
GTATCAA	5510	41.6784	2
CATGGGG	11475	40.64795	4
CAACGCA	5980	38.104202	6
CATGGGA	7855	37.94607	4
ATCAACG	6015	37.783573	4
TCAACGC	6150	37.050915	5
AACGCAG	6325	36.590164	7
ATGGGGG	6060	32.20153	5
GAGTACA	11185	31.595537	1
TATCAAC	7475	31.19968	3
ACGCAGA	7635	28.987394	8
CGCAGAG	7865	27.458904	9
CATGGGT	3660	24.870565	4
ATGGGGA	5735	24.68987	5
ATGGGGC	4200	23.51441	5
ATGGGAG	4320	23.13667	5