SRR936185_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936185_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	238587
Sequences flagged as poor quality	0
Sequence length	125
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1530	0.6412755095625495	No Hit
AAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	635	0.2661502931844568	No Hit
GAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	542	0.22717080142673324	No Hit
GATATAGGCTTACTAGGAGGGTGAATACGTAGGCTTGAATTAATGCTACT	437	0.18316169782930336	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	343	0.14376307175160424	No Hit
GTATTGGAATTAGTGAAATTGGAGTTCCTTGTGGAAGGAAGTGGGCAAGT	324	0.1357995196720693	No Hit
GTACATGGGATGACCCACCAAACTCATGCATATCACATAGTTAATCCAAG	293	0.12280635575282811	No Hit
TTCCAATACTTATTATTATTGAAACAATTAGCCTATTTATTCAACCAATG	251	0.10520271431385617	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	485	0.0	61.329617	1
GGATAGC	40	1.768798E-4	59.5022	8
CGTATAG	70	9.121286E-7	50.991196	1
CGCAAAG	35	0.007794042	50.991196	2
GTACATG	1980	0.0	49.87523	1
AAAGACG	25	5.295505E-4	47.661713	18-19
GGGTATG	75	1.4655052E-6	47.601765	7
GGTATGC	50	5.323083E-4	47.60176	8
GAACAAA	355	0.0	46.921474	1
TACATGG	2125	0.0	46.471977	2
ACATGGG	2115	0.0	43.316402	3
GGATATG	70	5.444482E-5	42.492664	1
GTATCAA	715	0.0	42.433235	2
CATGGGG	695	0.0	40.230465	4
ATGGGTA	185	0.0	38.59602	5
TCAACGC	815	0.0	37.23451	5
TCCTCGA	40	1.1976357E-4	37.181084	78-79
TGGCGGG	65	0.0019354726	36.61674	9
GCTAGGC	65	0.0019374662	36.609066	2
CAACGCA	865	0.0	36.457996	6