SRR936089_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936089_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	63528
Sequences flagged as poor quality	0
Sequence length	77
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1896	2.9845107669059314	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1475	2.321810855056038	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCAGTA	15	0.0020907975	71.02758	63
AGATTGC	15	0.0020907975	71.02758	38
CGAGAAT	15	0.0020907975	71.02758	3
ACGAGAA	15	0.0020907975	71.02758	2
CATTGGT	15	0.0020973478	70.97166	25
AACGAGT	15	0.0020973478	70.97166	66
ACGAGTG	15	0.0020973478	70.97166	67
ACTGCAC	25	2.2175048E-4	56.77732	48
AACCCGG	20	0.006534293	53.270687	8
GAGATTG	20	0.006534293	53.270687	37
ATTTCAC	20	0.006534293	53.270687	30
TCAAACG	20	0.006534293	53.270687	63
CAAACGA	20	0.006554706	53.22874	64
AAACGAG	20	0.006554706	53.22874	65
TTCATAT	35	0.0011605953	40.58719	10
AAGGCTT	40	0.0022452197	35.48583	21
TACCCTT	55	2.7318098E-4	32.259842	47
AAGGTGA	45	0.0039990465	31.542957	23
AATATGA	45	0.0039990465	31.542957	50
ATATGAA	50	0.0066939183	28.38866	51