SRR936027_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936027_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	576255
Sequences flagged as poor quality	0
Sequence length	77
%GC	32

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	42964	7.455727065274921	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	32576	5.653052901927098	No Hit
CCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGG	882	0.15305724028424916	No Hit
GACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTAC	677	0.11748271164675361	No Hit
TACTGTTGCTTGATTTAGTCGGCCTGGGATGGCATCAGTTTTAAGTCCTA	671	0.11644150593053423	No Hit
ATACGTAGGCTTGAATTAATGCTACTGCAAATTCTAGAATTGTGAGTAGA	667	0.11574736878638799	No Hit
ATGGTTAGATCCACAAATTTCAGAGCATTGGCCATAGAATAACCCTGGTC	661	0.11470616307016859	No Hit
TACAAAATGTCAGTATCATGCTGCGGCTTCAAATCCGAAGTGATGTTTTG	655	0.11366495735394921	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	622	0.10793832591474262	No Hit
AGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCG	585	0.10151755733138976	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGCGAT	20	0.006572598	53.247005	26
CGGTATA	110	0.0	48.406372	10
GTCCGAG	30	5.479244E-4	47.33478	41
ATGGCGG	110	0.0	45.175358	6
GAGTCCG	35	0.0011709984	40.569145	39
GCGGTAT	150	0.0	37.864536	9
GTGGGTA	150	0.0	37.86125	1
ATAGGTG	105	1.0913936E-11	37.18838	14
TATAGGT	105	1.0913936E-11	37.18838	13
GATGGCG	135	0.0	36.809547	5
AGTCCGA	40	0.0022555296	35.501083	40
CGATTGC	55	2.7452424E-4	32.287727	68
AGATGGC	155	0.0	32.05993	4
ACGTATA	45	0.004018975	31.55378	2
GCTGAAT	180	0.0	29.584236	20
GGTATAT	180	0.0	29.581669	11
GCAAGAG	195	0.0	29.124039	29
GAACGAT	75	5.0678223E-5	28.400867	65
CGTATAG	50	0.006729887	28.395937	3
GACGTAT	50	0.006729887	28.395937	1