SRR936026_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936026_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	576750
Sequences flagged as poor quality	0
Sequence length	77
%GC	32

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	43078	7.469094061551799	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	32821	5.690680537494582	No Hit
CCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGG	913	0.15830082358040745	No Hit
GACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTAC	698	0.12102297355873429	No Hit
ATACGTAGGCTTGAATTAATGCTACTGCAAATTCTAGAATTGTGAGTAGA	668	0.11582141309059385	No Hit
ATGGTTAGATCCACAAATTTCAGAGCATTGGCCATAGAATAACCCTGGTC	661	0.11460771564802774	No Hit
TACTGTTGCTTGATTTAGTCGGCCTGGGATGGCATCAGTTTTAAGTCCTA	634	0.10992631122670135	No Hit
TACAAAATGTCAGTATCATGCTGCGGCTTCAAATCCGAAGTGATGTTTTG	613	0.10628521889900304	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGCAT	20	0.006562189	53.26835	48
TACCGAT	20	0.0065779677	53.23602	1
ATCGCCA	40	0.0022549361	35.50299	53
TATAGGT	170	0.0	35.496834	13
ATAGGTG	175	0.0	34.48563	14
CGCTCCG	55	2.7555847E-4	32.26705	10
CGGTATA	90	1.5530895E-7	31.550005	10
CGCCAGG	70	3.164124E-5	30.431135	15
ATGGCGG	95	2.4967085E-7	29.886889	6
TAGTCCA	60	4.5727217E-4	29.596096	50
GACCTAC	60	4.5866822E-4	29.580694	43
CGTGGGC	60	4.5890125E-4	29.57813	24
GCCGTGG	60	4.5890125E-4	29.57813	22
CAGCGCT	60	4.5913435E-4	29.575565	7
GAACGAT	65	7.2923105E-4	27.326586	65
CCGCCAG	65	7.3219545E-4	27.307627	14
TGTTTCG	65	7.325667E-4	27.305258	42
ACGAAGC	130	4.645699E-9	27.305258	42
TAGGTGG	225	0.0	26.824482	15
TAACAGA	225	0.0	26.815178	1