SRR936022_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR936022_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	180201
Sequences flagged as poor quality	0
Sequence length	77
%GC	25

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26233	14.557632865522388	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	25725	14.275725439925417	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	808	0.44838818874479053	No Hit
TGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	260	0.1442833280614425	No Hit
GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	226	0.1254155082380231	No Hit
AGTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCAG	195	0.10821249604608188	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTATAC	20	0.0065536886	53.27083	62
TTGTGGC	20	0.0065681026	53.24126	34
GTATCAT	55	6.0560433E-6	38.720917	30
TCGCCGT	70	7.7476216E-7	35.49417	25
CGTATCA	60	1.0999629E-5	35.49417	29
CCGTATC	65	1.9027557E-5	32.76385	28
GCCGTAT	65	1.9027557E-5	32.76385	27
CGCCGTA	65	1.906374E-5	32.75476	26
ATCATTA	85	3.5277371E-6	29.230494	32
CGCCGGA	50	0.0067093833	28.403221	68
TGTGGCT	50	0.006718489	28.395336	35
TGGTCGC	90	5.503942E-6	27.606575	22
TCATTAA	105	5.948659E-7	27.043179	33
CATTAAA	105	5.948659E-7	27.043179	34
GTCGCCG	110	8.928364E-7	25.813944	24
GGTCGCC	110	8.928364E-7	25.813944	23
TATCATT	90	1.7460415E-4	23.662779	31
GTGGTCG	110	2.607587E-5	22.5872	21
AAGTTGA	80	0.0024506545	22.183859	1
ATTAAAA	145	9.822648E-6	19.58299	35