SRR935991_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR935991_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	448261
Sequences flagged as poor quality	0
Sequence length	125
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTT	1442	0.32168758825773375	No Hit
ACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTCCCGCA	1427	0.31834132347003197	No Hit
GGTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTT	1325	0.29558672291365967	No Hit
TATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTC	860	0.19185251449490365	No Hit
GGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGAA	815	0.1818137201317982	No Hit
ATTCACGCATTAACCGTTCATCCTTTCCCGCATGCGCGTCGATATCTACC	809	0.1804752142167175	No Hit
GGGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGA	450	0.10038794363105422	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAACAAC	215	0.0	63.749233	1
TACGGGC	65	5.474776E-7	54.92179	4
GTGTACG	125	0.0	52.440674	1
GTCTAAG	60	2.1713602E-5	49.659725	1
GTATGAG	90	9.58953E-8	46.34908	1
GTTCTAG	65	3.484889E-5	45.839752	1
TGGAATC	355	0.0	43.57644	2
CTATAGA	55	8.4584655E-4	43.3394	1
GTGGAAT	405	0.0	42.670586	1
ATGGGAC	70	5.4473836E-5	42.499004	5
TATAGAG	70	5.4473836E-5	42.499004	2
ATATTAT	30	0.0012927948	39.763325	118-119
TATAGAA	60	0.0013078096	39.665737	2
GCGTTAT	65	0.0019230461	36.671803	1
TATACGG	65	0.0019378623	36.61453	2
TGTAAGG	120	9.2733353E-7	34.70752	2
AGTCGTC	155	5.1113602E-9	34.54372	7
GTATACG	70	0.0027662185	34.052387	1
CGTTATA	70	0.0027875006	33.999203	2
TGTACGG	175	4.4383341E-10	33.999203	2