SRR935989_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR935989_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	419682
Sequences flagged as poor quality	0
Sequence length	125
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTT	1032	0.24590046749681901	No Hit
ACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTCCCGCA	1030	0.24542391620322054	No Hit
GGTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTT	968	0.23065082610166746	No Hit
GGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGAA	760	0.18108949156742488	No Hit
ATTCACGCATTAACCGTTCATCCTTTCCCGCATGCGCGTCGATATCTACC	725	0.17274984392945134	No Hit
TATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTC	612	0.14582469584113686	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGACTA	25	0.0020572501	71.38849	9
TTAGGGC	40	1.7710477E-4	59.497498	4
TTATGCC	30	0.0042353855	59.497498	4
TAACAAC	215	0.0	55.419147	1
TTCACTA	35	0.0077977926	50.99178	8
GTCTTAG	65	3.4900688E-5	45.827377	1
TCTTAGG	65	3.517221E-5	45.767307	2
TCGTAGG	70	5.4473854E-5	42.49821	2
GTCATAG	130	9.0221874E-10	41.24464	1
CCATCCG	30	0.0013085811	39.664997	72-73
GTAGTAG	95	7.3962074E-6	37.626686	1
AGGTATA	40	1.19833145E-4	37.181507	10-11
GTACTAG	65	0.0019254573	36.661903	1
AGTAGAG	295	0.0	36.30356	2
TATAAGG	100	1.0608885E-5	35.698498	2
AGTAAGA	190	2.910383E-11	34.44592	2
CGCAGAA	330	0.0	34.256134	2
ATCCGAG	70	0.0027696826	34.043194	1
TTAGGGA	70	0.0027875535	33.99857	4
GTAGGGT	105	1.4818752E-5	33.99857	4