SRR935987_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR935987_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	548919
Sequences flagged as poor quality	0
Sequence length	125
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTT	1697	0.30915308087349863	No Hit
ACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTCCCGCA	1592	0.2900245755749027	No Hit
GGTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTT	1503	0.27381089013133086	No Hit
GGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGAA	1137	0.2071343859476535	No Hit
ATTCACGCATTAACCGTTCATCCTTTCCCGCATGCGCGTCGATATCTACC	1118	0.2036730373698123	No Hit
TATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTC	1087	0.19802557390070302	No Hit
GGGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGA	641	0.11677497044190492	No Hit
GTATCAACGCAGAGTCGCCGGACAATTCACGCATTAACCGTTCATCCTTT	622	0.11331362186406374	No Hit
ACGCAGAGTCGCCGGACAATTCACGCATTAACCGTTCATCCTTTCCCGCA	553	0.1007434612392721	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTAAT	25	0.0020474063	71.47782	1
TCTACAA	30	0.004238508	59.488888	2
TATGGGA	70	1.3418685E-8	59.488884	4
CTATGGG	65	5.4832526E-7	54.912815	3
GTCCAGT	95	2.6029738E-9	50.159878	1
TCGTAGG	60	2.1942978E-5	49.574074	2
GGAAACA	525	0.0	45.382748	1
TATGGGT	80	2.2946406E-6	44.616665	4
GGTATTC	35	5.4563574E-5	42.493996	28-29
TCATAGG	170	7.2759576E-12	38.492805	2
TAACAAC	255	0.0	37.374027	1
GTTGTAG	80	1.1890049E-4	37.228035	1
TTAGGGA	80	1.1979707E-4	37.180553	4
TTGTAGG	80	1.1979707E-4	37.180553	2
TGCTAGG	80	1.1979707E-4	37.180553	2
AGTAATT	80	1.1986133E-4	37.17717	7
GTATAGG	210	0.0	36.87348	1
TGATAGA	65	0.0019397968	36.608543	3
ATAAGGG	115	6.6587927E-7	36.210625	3
GTCTATG	100	1.0532822E-5	35.73891	1