SRR935982_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR935982_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	454890
Sequences flagged as poor quality	0
Sequence length	125
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTT	1166	0.25632570511552244	No Hit
ACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTCCCGCA	1158	0.2545670381850557	No Hit
GGTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTT	1090	0.23961836927608873	No Hit
GGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGAA	898	0.19741036294488776	No Hit
ATTCACGCATTAACCGTTCATCCTTTCCCGCATGCGCGTCGATATCTACC	824	0.18114269383807075	No Hit
TATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTC	757	0.16641385829541208	No Hit
GGGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGA	509	0.11189518345094418	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTCGTA	15	2.7023468E-4	118.9812	7
TTCGTAC	15	2.7023468E-4	118.9812	8
TATTATG	30	0.0042357137	59.497143	2
GTATAAA	115	2.728484E-10	46.598843	1
GTGGAAT	235	0.0	45.607376	1
GGACTGG	70	5.4518358E-5	42.49329	8
AGGGGTT	85	3.4800141E-6	41.993362	6
TGGAATC	260	0.0	41.19033	2
GTATTAG	75	8.1461134E-5	39.69531	1
CTAGGGT	90	5.150305E-6	39.66476	4
GTATTGG	250	0.0	38.1075	1
TGTAAGG	95	7.4647724E-6	37.57714	2
GTCATAG	100	1.0555414E-5	35.72578	1
GTGTAAG	100	1.0555414E-5	35.72578	1
AGTTAGA	85	1.7093448E-4	34.998314	2
GTCTTGG	140	7.996459E-8	34.02455	1
TCGGGAC	105	1.4822084E-5	33.998367	3
GCAGAGA	840	0.0	33.998367	3
TAGAGGC	35	0.0027908422	33.99463	24-25
ACGGGAT	105	1.4833247E-5	33.99463	5