SRR935981_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR935981_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	442990
Sequences flagged as poor quality	0
Sequence length	125
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTT	1187	0.2679518725027653	No Hit
ACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTCCCGCA	1158	0.2614054493329421	No Hit
GGTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTT	1109	0.25034425156324075	No Hit
GGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGAA	841	0.18984627192487416	No Hit
ATTCACGCATTAACCGTTCATCCTTTCCCGCATGCGCGTCGATATCTACC	840	0.18962053319488023	No Hit
TATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTC	801	0.18081672272511795	No Hit
GGGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGA	478	0.10790311293708661	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGAGGA	25	0.0020563274	71.397224	4
CATAATC	15	0.004240674	59.484253	58-59
TATGGGT	55	1.3096886E-5	54.088802	4
ATGGGTG	55	1.311441E-5	54.07659	5
TCTAAGG	45	3.169407E-4	52.88683	2
TGAGGTA	35	0.0078012655	50.986507	8
GTAACAA	130	0.0	50.4125	1
TCTATGG	120	7.2759576E-12	49.581406	2
TAACAAC	245	0.0	48.635433	1
ACAACAC	505	0.0	42.404617	5
TCATAGG	100	2.2220956E-7	41.64838	2
GAAAACA	445	0.0	41.50406	1
GTCTAAG	60	0.0012992015	39.718937	1
CTATGGG	120	2.071829E-8	39.665123	3
GTCTATG	155	1.1823431E-10	38.437683	1
GCAGAGA	845	0.0	37.318077	3
GATTGAT	80	1.1870428E-4	37.236504	1
GGAGTAG	40	1.1983186E-4	37.181858	22-23
GTCATAG	115	6.577011E-7	36.265118	1
GTATCGG	115	6.577011E-7	36.265118	1