SRR935967_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR935967_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2945142
Sequences flagged as poor quality	0
Sequence length	125
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT	7602	0.25811998199068165	No Hit
CCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAAT	6477	0.21992148426120034	No Hit
GAGTCAGTGGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTC	5967	0.2026048319571688	No Hit
GTCTAACCCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT	5872	0.19937918103779037	No Hit
GTCTAATCCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT	5382	0.18274161313783852	No Hit
GTAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACG	4218	0.14321890082040187	No Hit
ATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATC	3468	0.11775323566741433	No Hit
GTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA	3144	0.10675206832132372	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	8820	59.78708	1
GTATCAA	14980	50.117737	1
AGTAGTA	1570	45.09982	2
GATAGCG	1815	43.589767	9
GAGTAGT	2375	40.64284	1
GAGTAAG	2205	39.722942	1
TATCAAC	18970	39.333057	2
GATTGTG	3935	39.001785	9
AGGGTAA	4150	38.98794	6
GAGTACG	1160	37.497086	1
GAGTTAG	1755	37.34636	1
GGGGTAA	6810	36.774307	9
AGTAAGG	1635	36.028397	2
ATCAACG	20735	35.752354	3
TAAGGGG	1970	35.637432	4
GTAAGGG	1840	35.568493	3
TCAACGC	20880	35.418587	4
AGTAACG	710	35.198036	2
GAGTCAG	6185	34.488636	1
GTATGGG	1495	34.275986	1