SRR935967_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR935967_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2945142
Sequences flagged as poor quality	0
Sequence length	125
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT	7670	0.2604288689645525	No Hit
CCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAAT	7152	0.24284058289888907	No Hit
GTCTAACCCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT	6179	0.20980312664041326	No Hit
GTCTAATCCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT	5767	0.1958139879163721	No Hit
GAGTCAGTGGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTC	5023	0.17055204808460847	No Hit
GTAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACG	4699	0.15955088073851786	No Hit
ATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATC	3784	0.12848276925187307	No Hit
GTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA	3182	0.1080423286890751	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	10040	63.819695	1
GTATCAA	17060	50.19481	1
GATAGCG	1590	50.140198	9
AGGGTAA	4370	41.115337	6
GAGTAAG	2230	40.97088	1
GATTGTG	4090	40.87534	9
AGTAGTA	1720	39.844734	2
TATCAAC	22005	38.86262	2
GAGTTAG	1795	37.925304	1
GTAGTAG	3295	36.97119	1
GAGTAGT	2510	35.9246	1
GTGGTAT	4610	35.622177	1
ATCAACG	23945	35.614456	3
TCAACGC	24450	34.87886	4
TGGTATC	4460	34.740818	2
GGGATAG	2420	34.41843	7
GAGTACG	1270	34.324787	1
TAGTAGG	3525	33.812122	2
CAACGCA	25360	33.605644	5
GGATAGC	2415	33.504265	8