SRR935939_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR935939_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	371109
Sequences flagged as poor quality	0
Sequence length	125
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTCCCGCA	842	0.22688751822240905	No Hit
GTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTT	792	0.21341438768663654	No Hit
GGTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTT	753	0.20290534586873396	No Hit
ATTCACGCATTAACCGTTCATCCTTTCCCGCATGCGCGTCGATATCTACC	612	0.16491111775785552	No Hit
GGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGAA	607	0.16356380470427825	No Hit
TATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTC	466	0.1255695765933998	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGAAAC	55	1.7259299E-7	64.90012	2
TCGGCTA	15	0.0042405417	59.483765	46-47
AGTCTTG	30	0.0042388733	59.483765	7
CATAAGT	15	0.0042405417	59.483765	38-39
GCTAATT	15	0.0042405417	59.483765	48-49
TGTAAGG	60	2.1922799E-5	49.576485	2
GTGGAAA	75	1.4586185E-6	47.644787	1
GTATGAT	50	5.335082E-4	47.587013	3
GTGATAG	65	3.4960736E-5	45.812294	1
TATGATC	65	3.5212277E-5	45.75674	4
TATATGG	105	6.37192E-9	45.327072	2
TAACAAC	120	4.129106E-10	44.666985	1
GTATTAG	70	5.414673E-5	42.53999	1
ACTAGGG	70	5.4535838E-5	42.488407	3
GTATATG	115	1.4098987E-8	41.43025	1
GTACTAG	75	8.132721E-5	39.703987	1
TACTAGG	75	8.184591E-5	39.661182	2
ATATGGG	135	1.3242243E-9	39.65584	3
TAAGAGG	95	7.4725795E-6	37.568695	4
GTCCTAG	65	0.0019282842	36.649837	1