SRR935936_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR935936_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	410512
Sequences flagged as poor quality	0
Sequence length	125
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTCCCGCA	767	0.18683984877421367	No Hit
GTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTT	729	0.17758311571890714	No Hit
GGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGAA	713	0.17368554390614646	No Hit
GGTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTT	683	0.16637759675722025	No Hit
ATTCACGCATTAACCGTTCATCCTTTCCCGCATGCGCGTCGATATCTACC	605	0.14737693417001207	No Hit
TATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTC	432	0.10523443894453754	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCTAG	50	7.3960255E-6	59.564217	1
GTACTTT	15	0.0042364304	59.4989	22-23
TCCTAGG	50	7.4550608E-6	59.48441	2
AGTTTCA	30	0.0042390116	59.484406	7
TAACAAC	65	5.432139E-7	54.98235	1
GTCCAAG	50	5.3003023E-4	47.651375	1
TATAAGG	80	2.2944078E-6	44.613304	2
GTATATG	125	6.148184E-10	42.886234	1
TATATGG	145	5.820766E-11	41.02373	2
AAGATGT	30	0.0012908716	39.774967	118-119
TAAGGGT	75	8.1920916E-5	39.656273	4
ATACGGG	150	8.54925E-11	39.656273	3
TATACGG	120	2.075285E-8	39.65627	2
TGTAAGG	125	2.9740477E-8	38.070023	2
TAGGGTG	80	1.19797485E-4	37.177753	5
AGTTAAC	80	1.19797485E-4	37.177753	2
GTGTAAG	115	6.587725E-7	36.25648	1
GTATAAG	115	6.587725E-7	36.25648	1
TCTGAGG	115	6.657265E-7	36.2079	2
GTATACG	150	3.6652636E-9	35.73853	1