SRR935927_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR935927_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3987342
Sequences flagged as poor quality	0
Sequence length	125
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT	8022	0.20118665517028636	No Hit
CCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAAT	7945	0.19925554416952446	No Hit
GAGTCAGTGGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTC	4863	0.12196094541175549	No Hit
GTCTAACCCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT	4860	0.12188570732081672	No Hit
GTCTAATCCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT	4475	0.11223015231700717	No Hit
ATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATC	4363	0.10942126358862621	No Hit
GTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA	4291	0.10761554940609558	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	4094	0.10267491476778265	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	11435	61.902325	1
GTATCAA	18880	49.547802	1
TATCAAC	24000	38.62583	2
AGTAGTA	1915	37.284996	2
GAGTAGT	2765	37.064663	1
GAGTAAG	2655	35.233994	1
ATCAACG	27840	33.168232	3
TCAACGC	28055	32.914047	4
GATTGTG	4325	32.183372	9
AGGGTAA	4525	32.075874	6
AACGCAG	28925	31.87613	6
TAGTAGG	2605	31.748901	2
TGGTATC	5170	31.649277	2
CAACGCA	29315	31.534805	5
GAGTAGG	4035	30.862385	1
GAGTTAG	1815	30.858725	1
GTGGTAT	5820	30.610817	1
GTAAGGG	2105	30.243464	3
TAGACGG	675	29.087744	4
GGGGTAA	6835	28.458437	9