SRR935922_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR935922_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	445489
Sequences flagged as poor quality	0
Sequence length	125
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTT	1194	0.2680200857933641	No Hit
ACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTCCCGCA	1192	0.26757114092603856	No Hit
GGTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTT	1061	0.23816525211621387	No Hit
GGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGAA	791	0.17755769502726218	No Hit
ATTCACGCATTAACCGTTCATCCTTTCCCGCATGCGCGTCGATATCTACC	772	0.17329271878766928	No Hit
TATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTC	673	0.15106994785505365	No Hit
GGGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGA	495	0.1111138546630781	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATTGTG	50	7.4553154E-6	59.48547	9
TATAAGG	100	6.91216E-11	53.54293	2
GGTACCG	35	0.0078006666	50.98754	8
GTATTCG	50	5.285469E-4	47.679356	1
ATAAGGG	115	2.746674E-10	46.559067	3
GTATAAG	130	1.8189894E-11	45.84553	1
GTACAAG	150	1.8189894E-12	43.706074	1
GTATAGG	205	0.0	43.60916	1
TATTCGG	55	8.528324E-4	43.26701	2
TACTAGG	110	9.618816E-9	43.26701	2
ACTAGGG	130	9.1495167E-10	41.18687	3
GTACTAG	135	1.3005774E-9	39.73279	1
GTCTGTA	60	0.0013084994	39.661427	2
TCTGTAC	60	0.0013084994	39.661427	3
AGTTAGA	80	1.1972223E-4	37.18259	2
ACAACAC	455	0.0	36.606438	5
GTATTGG	165	2.3101165E-10	36.120724	1
GGGATTG	100	1.0625066E-5	35.69128	7
GTCTAGG	120	9.1514084E-7	34.766193	1
TGTAAGG	120	9.281048E-7	34.703747	2