SRR935908_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR935908_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	117959
Sequences flagged as poor quality	0
Sequence length	125
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTCCCGCA	587	0.49763053264269785	No Hit
GGTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTT	575	0.4874575064217228	No Hit
GTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTT	482	0.4086165532091659	No Hit
TATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTC	373	0.3162115650353089	No Hit
GGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGAA	308	0.2611076730050272	No Hit
ATTCACGCATTAACCGTTCATCCTTTCCCGCATGCGCGTCGATATCTACC	245	0.20769928534490797	No Hit
GGTATCAACGCAGAGTCGCCGGACAATTCACGCATTAACCGTTCATCCTT	203	0.17209369357149518	No Hit
GTGGTATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCC	201	0.17039818920133268	No Hit
GTATCAACGCAGAGTCGCCGGACAATTCACGCATTAACCGTTCATCCTTT	171	0.14496562364889495	No Hit
ACGCAGAGTCGCCGGACAATTCACGCATTAACCGTTCATCCTTTCCCGCA	160	0.13564034961300114	No Hit
GGGGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGA	149	0.1263150755771073	No Hit
TATCAACGCAGAGTCGCCGGACAATTCACGCATTAACCGTTCATCCTTTC	146	0.12377181902186354	No Hit
ATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGAATTGCCC	142	0.12038081028153849	No Hit
GGTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGAAT	128	0.10851227969040089	No Hit
ATCAACGCAGAGTCGCCGGGCAATTCACGCATTAACCGTTCATCCTTTCC	124	0.10512127095007587	No Hit
GTAGATATCGACGCGCATGCGGGAAAGGATGAACGGTTAATGCGTGAATT	121	0.10257801439483209	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGTAA	20	8.470262E-4	89.22965	8
TAGATGG	45	3.972111E-6	66.09604	4
TAACAAC	30	0.004195542	59.61279	1
TTCACAG	15	0.004229099	59.511665	24-25
GCACGTA	15	0.004229099	59.511665	114-115
ACGTAGT	15	0.004229099	59.511665	116-117
AGTAGAT	50	7.4207856E-6	59.486435	2
CACAAAG	40	1.7674279E-4	59.486435	8
GTCTGGG	65	5.368438E-7	55.027187	1
GTAAGAG	45	3.1628157E-4	52.876835	3
GTCATAG	35	0.0077209617	51.096672	1
GTGGAAT	35	0.0077209617	51.096672	1
GTACTAG	35	0.0077209617	51.096672	1
GAAAACA	70	8.952975E-7	51.096672	1
GATGGGT	35	0.0077860365	50.988373	6
TACTAGG	35	0.0077860365	50.988373	2
TCTATGG	35	0.0077860365	50.988373	2
GTCCTTC	25	5.329924E-4	47.589146	54-55
AGTAAGA	50	5.3190195E-4	47.589146	2
AGATGGG	65	3.505606E-5	45.758797	5