Basic Statistics
Measure | Value |
---|---|
Filename | SRR1364427_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1446552 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 2955 | 0.0 | 52.374 | 1 |
GGTATCA | 1825 | 0.0 | 52.18636 | 1 |
TCAACGC | 3395 | 0.0 | 43.798042 | 4 |
ATCAACG | 3390 | 0.0 | 43.68568 | 3 |
CAACGCA | 3440 | 0.0 | 43.3995 | 5 |
AACGCAG | 3530 | 0.0 | 41.450512 | 6 |
TATCAAC | 3730 | 0.0 | 40.979225 | 2 |
GTACATG | 8865 | 0.0 | 38.407597 | 1 |
TACATGG | 9055 | 0.0 | 36.78231 | 2 |
ACATGGG | 9190 | 0.0 | 34.494602 | 3 |
ACGCAGA | 4475 | 0.0 | 32.697273 | 7 |
CGCAGAG | 4595 | 0.0 | 31.584482 | 8 |
CATGGGA | 6430 | 0.0 | 29.87762 | 4 |
CATGGGG | 3345 | 0.0 | 29.160984 | 4 |
GCAGAGT | 5330 | 0.0 | 26.559458 | 9 |
GAGTACA | 6955 | 0.0 | 26.103731 | 1 |
ATGGGGA | 1860 | 0.0 | 25.90249 | 5 |
GTATAGA | 535 | 0.0 | 25.590214 | 1 |
ATGGGAG | 2780 | 0.0 | 25.246819 | 5 |
AGTACAT | 6850 | 0.0 | 25.179485 | 2 |