SRR1364326_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1364326_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1023894
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACTTTTTTTTTTTTTTTTTTTTT	14314	1.3979962769583572	No Hit
GTATCAACGCAGAGTACTTTTTTTT	13631	1.3312901530822527	No Hit
TATCAACGCAGAGTACTTTTTTTTT	10350	1.0108468259409666	No Hit
GGTATCAACGCAGAGTACTTTTTTT	9966	0.9733429437031568	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	6602	0.6447933086823441	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	4149	0.40521772761633534	No Hit
GTGGTATCAACGCAGAGTACTTTTT	2230	0.21779598278728074	No Hit
GTGGTATCAACGCAGAGTACATGGG	1741	0.17003713275006982	No Hit
ATCAACGCAGAGTACTTTTTTTTTT	1658	0.16193082487054325	No Hit
GCAGAGTACTTTTTTTTTTTTTTTT	1467	0.14327655011163265	No Hit
GTATAACGCAGAGTACTTTTTTTTT	1391	0.13585390675206613	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAA	1181	0.1153439711532639	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCTCG	40	2.7670618E-4	16.6194	17
TACGGTG	35	0.0021630782	16.292963	5
GAACGGC	35	0.002166613	16.288982	6
GGCGTAG	55	1.1259364E-5	15.547814	10
TATCACG	75	5.8313162E-8	15.201564	2
TGAACCG	40	0.005261911	14.256344	5
CGTAAGA	40	0.00527387	14.251467	2
TATAACG	210	0.0	14.025253	2
CCAATAC	75	9.63626E-7	13.93681	3
TAACGCA	230	0.0	13.634502	4
TGCTAGC	70	7.24904E-6	13.5728245	2
ATAACGC	240	0.0	13.461692	3
GTGCACG	150	0.0	13.298769	11
ATCGTCT	50	0.0015027468	13.295522	15
GTCTCGG	50	0.0015033002	13.294871	18
GCCCCCG	155	0.0	12.866005	18
ACGCCGA	75	1.4743704E-5	12.669208	7
TTACCGC	60	4.1015423E-4	12.662401	16
GTGCTAG	70	1.0901462E-4	12.214348	1
CGCGGGC	70	1.0936326E-4	12.210172	13