SRR1364321_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1364321_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2802213
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	29198	1.0419621920246604	No Hit
TATCAACGCAGAGTACTTTTTTTTT	22782	0.8130002965513328	No Hit
GGTATCAACGCAGAGTACTTTTTTT	18845	0.6725041957909695	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	13205	0.4712346991467101	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	9727	0.34711850954941686	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	8951	0.3194261107203485	No Hit
GTGGTATCAACGCAGAGTACATGGG	3684	0.1314675222761439	No Hit
ATCAACGCAGAGTACTTTTTTTTTT	3498	0.12482991121659916	No Hit
GCAGAGTACTTTTTTTTTTTTTTTT	3358	0.11983385988145798	No Hit
GTGGTATCAACGCAGAGTACTTTTT	3223	0.11501623895114325	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGCGCG	55	1.9590512E-4	13.819831	9
TATCACG	165	0.0	13.818104	2
TATAACG	330	0.0	13.530227	2
GGTATCA	5120	0.0	13.472071	1
TAACGCA	345	0.0	12.943805	4
ATAACGC	375	0.0	12.666822	3
GTAGGAC	105	1.9956133E-8	12.6668215	3
CGAATCG	55	0.003074971	12.088036	16
CGCGCCA	175	0.0	11.943855	10
TAGTCGG	65	8.0021186E-4	11.696627	5
GTATAAC	440	0.0	11.6602745	1
ACAACCG	165	7.2759576E-12	11.519405	5
ATGCGTA	190	0.0	11.497267	13
GTGCACG	365	0.0	11.451377	11
GTGGTAT	1420	0.0	11.374393	1
TAGACAG	385	0.0	11.354842	5
CGTCTCG	110	4.990634E-7	11.224204	17
CGCGGTT	220	0.0	11.224004	18
TCTACGG	60	0.0058779004	11.083271	2
TGCACGG	345	0.0	11.010892	12