SRR1364318_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1364318_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2787000
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	34411	1.234696806602081	No Hit
TATCAACGCAGAGTACTTTTTTTTT	27036	0.970075349838536	No Hit
GGTATCAACGCAGAGTACTTTTTTT	22546	0.8089702188733404	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	19474	0.6987441693577323	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	11669	0.4186939361320416	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	11514	0.4131324004305705	No Hit
ATCAACGCAGAGTACTTTTTTTTTT	4446	0.1595263724434876	No Hit
GCAGAGTACTTTTTTTTTTTTTTTT	4254	0.1526372443487621	No Hit
GTGGTATCAACGCAGAGTACTTTTT	4014	0.14402583423035523	No Hit
GTGGTATCAACGCAGAGTACATGGG	3696	0.1326157158234661	No Hit
GTATAACGCAGAGTACTTTTTTTTT	3220	0.11553641908862576	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATAACG	400	0.0	15.438302	2
AACCGTC	95	3.0559022E-10	15.001319	7
TATCACG	200	0.0	14.725765	2
TAACGCA	470	0.0	13.9492855	4
AGTCCGG	70	7.2649345E-6	13.571891	10
ATAACGC	500	0.0	13.301885	3
CGTCCGA	65	5.4611246E-5	13.152406	11
GTCGGTT	305	0.0	13.078187	12
ATCACGC	235	0.0	12.938004	3
GGTATCA	5825	0.0	12.803929	1
CGACCGT	60	4.0685563E-4	12.675971	19
CGGTTAC	60	4.0914232E-4	12.667552	9
TGGTCGG	325	0.0	12.569658	10
CGCGCCA	185	0.0	12.324744	10
CTGGTCG	335	0.0	12.194882	9
TAATCCG	55	0.0030654157	12.093057	4
CGAAAAT	55	0.003075321	12.087849	14
CGGTTTG	340	0.0	11.732323	14
TCACGCA	270	0.0	11.613174	4
AGACGAA	320	0.0	11.578519	10