SRR1364304_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1364304_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1122324
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAA	11190	0.9970382884086948	No Hit
GTATCAACGCAGAGTACTTTTTTTT	6138	0.5469008949287372	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAA	5792	0.516072007726824	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	5065	0.45129570427078103	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3593	0.32013928241755496	No Hit
GAACAAAAAAAAAAAAAAAAAAAAA	3307	0.29465644501944177	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNN	3290	0.29314173090836515	No Hit
GGTATCAACGCAGAGTACTTTTTTT	2720	0.24235425777226538	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	2164	0.19281419625705232	No Hit
AAACAAAAAAAAAAAAAAAAAAAAA	2131	0.18987386886496235	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1401	0.12483026291872935	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATAACG	150	0.0	15.822108	2
CGCATAT	55	1.1286231E-5	15.544173	8
ATAACGC	165	0.0	15.534434	3
TAACGCA	165	0.0	14.975166	4
GACGTCT	70	4.3853834E-7	14.942727	15
GAACAAA	825	0.0	14.383093	1
GAGACCG	60	2.5430654E-5	14.264152	17
GAGTGCG	40	0.0052807597	14.248825	7
CGAGTGG	40	0.0052823285	14.248188	10
CGTCTCG	55	1.9429435E-4	13.831905	17
GTATAAC	225	0.0	13.50093	1
TGACCGA	155	0.0	13.497262	19
GGCGTAG	50	0.0015005245	13.298308	10
ATCGTCT	65	5.4015516E-5	13.166319	15
GCGTAGG	65	5.5162047E-5	13.136881	11
TTGACCG	160	0.0	13.075474	18
AGGACCG	95	7.348535E-8	13.004168	5
TTTGCGC	170	0.0	12.8657055	17
GGACGTC	60	4.0563112E-4	12.679246	14
CGGGGAT	60	4.094818E-4	12.665054	10