SRR1364267_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1364267_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1736464
Sequences flagged as poor quality	0
Sequence length	25
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAA	10107	0.5820448912272296	No Hit
GTATCAACGCAGAGTACTTTTTTTT	7537	0.4340429746887929	No Hit
TATCAACGCAGAGTACTTTTTTTTT	5279	0.30400860599471113	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4481	0.2580531470851109	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAA	4294	0.2472841360373725	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	3564	0.2052446811451317	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNN	3451	0.19873720388099034	No Hit
GAACAAAAAAAAAAAAAAAAAAAAA	2985	0.17190105870320377	No Hit
AAACAAAAAAAAAAAAAAAAAAAAA	2205	0.12698218909231634	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	2080	0.11978365229569976	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	2018	0.11621317804457795	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGCCGA	85	2.69496E-7	13.413661	19
CCTTACG	50	0.00149579	13.304571	2
ATAACGC	155	1.8189894E-12	12.262631	3
CTCAACG	165	0.0	12.095413	4
GCGCTCG	55	0.003064777	12.092968	14
ACATGGT	950	0.0	12.004471	3
TAACGCA	200	0.0	11.879424	4
TAATACC	185	0.0	11.81521	4
CGACCGT	65	8.0147234E-4	11.693961	19
GGTATCA	3260	0.0	11.48554	1
TTGCGCG	390	0.0	11.450336	18
GGTCTCA	200	0.0	11.403918	1
TACATGT	1195	0.0	11.3721075	2
CGGGATT	70	0.001486923	10.861188	4
TATAACG	175	2.0008883E-11	10.860874	2
TGACCGA	175	2.0008883E-11	10.858678	19
AAGTGCC	70	0.0014941064	10.854916	7
ACTCATA	290	0.0	10.808127	7
GTATCAA	7905	0.0	10.783591	1
CATGGTA	885	0.0	10.738462	4