##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043484_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 37875 Sequences flagged as poor quality 0 Sequence length 51 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46693069306931 31.0 31.0 33.0 30.0 34.0 2 30.569742574257425 31.0 31.0 34.0 26.0 34.0 3 31.543102310231024 31.0 31.0 34.0 28.0 34.0 4 35.16520132013201 37.0 35.0 37.0 32.0 37.0 5 35.493993399339935 37.0 35.0 37.0 33.0 37.0 6 35.60596699669967 37.0 35.0 37.0 35.0 37.0 7 33.63630363036304 37.0 35.0 37.0 31.0 37.0 8 34.64467326732673 37.0 35.0 37.0 31.0 37.0 9 36.72794719471947 39.0 37.0 39.0 32.0 39.0 10 36.68491089108911 39.0 35.0 39.0 32.0 39.0 11 36.408580858085806 38.0 35.0 39.0 32.0 39.0 12 36.39300330033003 39.0 35.0 39.0 32.0 39.0 13 36.419696369636966 39.0 35.0 39.0 32.0 39.0 14 37.626851485148514 40.0 35.0 41.0 33.0 41.0 15 37.68340594059406 40.0 35.0 41.0 33.0 41.0 16 37.439762376237624 40.0 35.0 41.0 32.0 41.0 17 37.41433663366337 40.0 35.0 41.0 32.0 41.0 18 37.278864686468644 39.0 35.0 41.0 32.0 41.0 19 37.17135313531353 39.0 35.0 41.0 32.0 41.0 20 37.03725412541254 39.0 35.0 41.0 32.0 41.0 21 36.93140594059406 38.0 35.0 41.0 32.0 41.0 22 36.84852805280528 38.0 35.0 40.0 32.0 41.0 23 36.81164356435644 38.0 35.0 40.0 32.0 41.0 24 36.68858085808581 38.0 35.0 40.0 31.0 41.0 25 36.55672607260726 38.0 35.0 40.0 31.0 41.0 26 36.29185478547855 38.0 35.0 40.0 31.0 41.0 27 36.15574917491749 38.0 35.0 40.0 30.0 41.0 28 35.94759075907591 37.0 35.0 40.0 30.0 41.0 29 35.81829702970297 38.0 34.0 40.0 30.0 41.0 30 35.634957095709574 37.0 34.0 40.0 29.0 41.0 31 35.555405940594056 38.0 34.0 40.0 29.0 41.0 32 35.53174917491749 38.0 34.0 40.0 29.0 41.0 33 35.276514851485146 37.0 34.0 40.0 27.0 41.0 34 35.14484488448845 37.0 34.0 40.0 26.0 41.0 35 35.06526732673267 37.0 34.0 40.0 26.0 41.0 36 34.9720396039604 37.0 34.0 40.0 26.0 41.0 37 34.862468646864684 37.0 34.0 40.0 25.0 41.0 38 34.715458745874585 37.0 34.0 40.0 24.0 41.0 39 34.59680528052805 36.0 34.0 40.0 24.0 41.0 40 34.47081188118812 36.0 34.0 40.0 24.0 41.0 41 34.39738613861386 36.0 33.0 40.0 24.0 41.0 42 34.2579801980198 35.0 33.0 40.0 23.0 41.0 43 34.078204620462046 35.0 33.0 40.0 23.0 41.0 44 33.88607260726073 35.0 33.0 40.0 23.0 41.0 45 33.61454785478548 35.0 33.0 40.0 22.0 41.0 46 33.604726072607264 35.0 33.0 39.0 23.0 41.0 47 33.5486204620462 35.0 33.0 39.0 23.0 41.0 48 33.45285808580858 35.0 33.0 39.0 23.0 41.0 49 33.403036303630365 35.0 33.0 39.0 23.0 41.0 50 33.34574257425743 35.0 33.0 39.0 23.0 41.0 51 32.88113531353135 35.0 32.0 38.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 0.0 14 3.0 15 3.0 16 3.0 17 6.0 18 31.0 19 33.0 20 76.0 21 103.0 22 184.0 23 228.0 24 350.0 25 469.0 26 679.0 27 740.0 28 841.0 29 974.0 30 1076.0 31 1183.0 32 1448.0 33 2121.0 34 3799.0 35 3703.0 36 3628.0 37 4413.0 38 5577.0 39 6201.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.29438943894389 18.518811881188117 23.931353135313532 27.25544554455446 2 30.363036303630363 21.05082508250825 26.062046204620458 22.52409240924092 3 27.97623762376238 22.822442244224423 28.6019801980198 20.5993399339934 4 24.712871287128714 25.555115511551158 26.55313531353135 23.17887788778878 5 22.48712871287129 35.6013201320132 24.293069306930693 17.61848184818482 6 86.46600660066007 1.9564356435643564 10.307590759075907 1.26996699669967 7 82.21782178217822 7.007260726072608 9.526072607260726 1.2488448844884488 8 82.05148514851484 3.326732673267327 11.580198019801982 3.0415841584158416 9 47.255445544554455 17.951155115511554 18.138613861386137 16.654785478547854 10 32.3009900990099 18.114851485148513 26.405280528052806 23.17887788778878 11 29.87194719471947 14.571617161716171 34.735313531353135 20.82112211221122 12 25.09042904290429 16.07392739273927 35.24752475247524 23.588118811881188 13 19.973597359735972 20.921452145214523 38.2970297029703 20.80792079207921 14 20.895049504950496 18.727392739273927 37.5023102310231 22.875247524752478 15 26.67722772277228 14.059405940594061 36.34323432343234 22.920132013201318 16 24.76831683168317 16.314191419141913 33.560396039603965 25.35709570957096 17 25.919471947194722 20.615181518151815 30.735313531353135 22.730033003300328 18 26.130693069306933 26.01980198019802 27.26864686468647 20.580858085808583 19 29.14587458745875 21.57095709570957 26.78283828382838 22.500330033003298 20 29.09306930693069 23.918151815181517 29.21188118811881 17.77689768976898 21 23.68052805280528 18.801320132013203 32.121452145214526 25.396699669967 22 26.851485148514854 20.691749174917494 30.73267326732673 21.724092409240924 23 29.169636963696373 20.57029702970297 30.088448844884493 20.17161716171617 24 30.172937293729372 17.47326732673267 27.300330033003302 25.053465346534654 25 23.21848184818482 20.26138613861386 29.68976897689769 26.830363036303627 26 21.005940594059407 18.92013201320132 32.6970297029703 27.376897689768974 27 23.71221122112211 22.14125412541254 31.149834983498348 22.996699669966997 28 25.499669966996702 24.451485148514852 28.034323432343232 22.014521452145214 29 25.533993399339934 19.44818481848185 33.932673267326734 21.085148514851486 30 31.339933993399338 19.107590759075908 29.029702970297027 20.522772277227723 31 31.08910891089109 20.93729372937294 26.7036303630363 21.269966996699672 32 31.693729372937295 18.954455445544554 25.82970297029703 23.52211221122112 33 26.069966996699666 21.594719471947194 29.71089108910891 22.624422442244224 34 24.937293729372936 23.765016501650166 28.374917491749173 22.922772277227725 35 27.184158415841587 27.033663366336636 24.46996699669967 21.312211221122112 36 27.165676567656767 24.92145214521452 23.801980198019802 24.11089108910891 37 26.69042904290429 29.67656765676568 22.56633663366337 21.066666666666666 38 27.036303630363033 23.91023102310231 22.471287128712873 26.582178217821784 39 24.947854785478548 21.174917491749177 29.04026402640264 24.836963696369637 40 22.603300330033 23.865346534653465 28.26666666666667 25.264686468646865 41 21.357095709570956 28.195379537953798 23.696369636963695 26.751155115511548 42 21.306930693069308 21.098349834983498 25.54719471947195 32.04752475247525 43 23.052145214521452 19.786138613861386 30.18085808580858 26.980858085808578 44 27.332013201320134 22.075247524752477 27.141914191419144 23.45082508250825 45 27.84422442244224 22.822442244224423 27.01254125412541 22.320792079207923 46 23.894389438943893 24.227062706270626 26.627062706270628 25.251485148514853 47 22.196699669966996 26.489768976897686 28.425082508250828 22.888448844884486 48 26.31815181518152 24.792079207920793 26.9016501650165 21.98811881188119 49 23.437623762376237 21.10891089108911 30.0963696369637 25.35709570957096 50 21.724092409240924 23.16831683168317 32.38019801980198 22.727392739273927 51 21.90891089108911 20.332673267326733 30.233663366336632 27.524752475247528 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 8.0 1 89.5 2 171.0 3 695.5 4 1220.0 5 767.5 6 315.0 7 274.5 8 234.0 9 226.5 10 219.0 11 229.5 12 240.0 13 224.5 14 209.0 15 209.0 16 209.0 17 186.0 18 163.0 19 164.0 20 165.0 21 167.5 22 170.0 23 162.0 24 154.0 25 157.0 26 161.0 27 162.0 28 193.0 29 224.0 30 276.0 31 328.0 32 336.5 33 345.0 34 427.0 35 509.0 36 527.0 37 545.0 38 608.5 39 672.0 40 719.0 41 766.0 42 893.5 43 1021.0 44 1141.0 45 1261.0 46 1374.0 47 1487.0 48 1763.5 49 2040.0 50 2117.5 51 2195.0 52 1962.5 53 1730.0 54 1851.5 55 1973.0 56 2247.5 57 2522.0 58 2655.0 59 2788.0 60 2814.0 61 2840.0 62 2899.0 63 2958.0 64 2669.0 65 2380.0 66 1995.5 67 1611.0 68 1342.0 69 1073.0 70 954.0 71 835.0 72 822.0 73 809.0 74 699.0 75 445.5 76 302.0 77 219.5 78 137.0 79 106.0 80 75.0 81 56.0 82 37.0 83 26.0 84 15.0 85 10.0 86 5.0 87 3.5 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 37875.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 76.21122112211222 #Duplication Level Percentage of deduplicated Percentage of total 1 83.45747445002598 63.603960396039604 2 12.191235059760956 18.58217821782178 3 3.0452104624978347 6.962376237623763 4 0.6894162480512732 2.1016501650165016 5 0.22518621167503897 0.8580858085808581 6 0.11432530746578902 0.5227722772277228 7 0.03810843582192967 0.20330033003300332 8 0.04157283907846873 0.25346534653465347 9 0.017322016282695307 0.1188118811881188 >10 0.14896934003117965 1.871947194719472 >50 0.017322016282695307 0.9161716171617161 >100 0.010393209769617183 2.0858085808580857 >500 0.0034644032565390613 1.9194719471947195 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 727 1.9194719471947195 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 474 1.2514851485148515 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 190 0.5016501650165017 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 126 0.3326732673267327 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 91 0.24026402640264025 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 76 0.20066006600660066 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 68 0.17953795379537954 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 56 0.14785478547854786 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 56 0.14785478547854786 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.013201320132013201 0.0 2 0.0 0.0 0.0 0.044884488448844885 0.0 3 0.0 0.0 0.0 0.07392739273927393 0.0 4 0.0 0.0 0.0 0.16897689768976898 0.0 5 0.0 0.0 0.0 0.35115511551155115 0.0 6 0.0 0.0 0.0 0.38811881188118813 0.0 7 0.0 0.0 0.0 0.5386138613861386 0.0 8 0.0 0.0 0.0 0.6706270627062706 0.0 9 0.0 0.0 0.0 0.8158415841584158 0.0 10 0.0 0.0 0.0 0.8897689768976897 0.0 11 0.0 0.0 0.0 0.9795379537953796 0.0 12 0.0 0.0 0.0 1.0402640264026404 0.0 13 0.0 0.0 0.0 1.0534653465346535 0.0 14 0.0 0.0 0.0 1.0772277227722773 0.0 15 0.0 0.0 0.0 1.1511551155115511 0.0 16 0.0 0.0 0.0 1.2462046204620463 0.0 17 0.0 0.0 0.0 1.3465346534653466 0.0 18 0.0 0.0 0.0 1.4046204620462046 0.0 19 0.0 0.0 0.0 1.4732673267326732 0.0 20 0.0 0.0 0.0 1.5419141914191419 0.0 21 0.0 0.0 0.0 1.6237623762376239 0.0 22 0.0 0.0 0.0 1.6976897689768977 0.0 23 0.0 0.0 0.0 1.768976897689769 0.0 24 0.0 0.0 0.0 1.813861386138614 0.0 25 0.0 0.0 0.0 1.871947194719472 0.0 26 0.0 0.0 0.0 1.937953795379538 0.0 27 0.0 0.0 0.0 2.01980198019802 0.0 28 0.0 0.0 0.0 2.0937293729372937 0.0 29 0.0 0.0 0.0 2.1755775577557754 0.0 30 0.0 0.0 0.0 2.2547854785478547 0.0 31 0.0 0.0 0.0 2.3155115511551156 0.0 32 0.0 0.0 0.0 2.378877887788779 0.0 33 0.0 0.0 0.0 2.4633663366336633 0.0 34 0.0 0.0 0.0 2.568976897689769 0.0 35 0.0 0.0 0.0 2.6745874587458744 0.0 36 0.0 0.0 0.0 2.798679867986799 0.0 37 0.0 0.0 0.0 2.9465346534653465 0.0 38 0.0 0.0 0.0 3.104950495049505 0.0 39 0.0 0.0 0.0 3.2607260726072607 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGCAGG 25 3.819533E-5 45.000004 1 AGAGGGC 25 3.819533E-5 45.000004 3 GAATGAT 25 3.819533E-5 45.000004 8 GAAGGGC 25 3.819533E-5 45.000004 3 ATGATAC 20 6.947081E-4 45.0 10 ATAGGGA 20 6.947081E-4 45.0 3 ATTGGGC 20 6.947081E-4 45.0 3 AGGGCGC 20 6.947081E-4 45.0 5 ATGCGGG 20 6.947081E-4 45.0 2 CAGAGGG 45 3.6379788E-10 45.0 2 GACGAGG 20 6.947081E-4 45.0 1 AACAGGG 20 6.947081E-4 45.0 2 TAGGGCA 20 6.947081E-4 45.0 4 GAGGGGT 20 6.947081E-4 45.0 4 TGCAGGG 45 3.6379788E-10 45.0 2 TGCGGGA 20 6.947081E-4 45.0 3 GGGCGCG 55 1.8189894E-12 44.999996 6 GAGGGCA 30 2.1101896E-6 44.999996 4 GCGAGGG 30 2.1101896E-6 44.999996 2 CGTTTTT 235 0.0 43.085106 1 >>END_MODULE