##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043483_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3999678 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.576455154639948 31.0 31.0 33.0 30.0 34.0 2 30.583572727604572 31.0 31.0 34.0 26.0 34.0 3 31.551979684364593 31.0 31.0 34.0 28.0 34.0 4 35.17373998606888 37.0 35.0 37.0 32.0 37.0 5 35.50558819985009 37.0 35.0 37.0 33.0 37.0 6 35.837056633058964 37.0 35.0 37.0 35.0 37.0 7 33.699367549087704 37.0 35.0 37.0 32.0 37.0 8 34.75653340093878 37.0 35.0 37.0 31.0 37.0 9 36.79428869023956 39.0 37.0 39.0 32.0 39.0 10 36.802119070585185 39.0 35.0 39.0 32.0 39.0 11 36.83647808648596 39.0 35.0 39.0 33.0 39.0 12 36.878144690647595 39.0 37.0 39.0 33.0 39.0 13 36.914411610134614 39.0 37.0 39.0 33.0 39.0 14 38.25383118341026 40.0 37.0 41.0 33.0 41.0 15 38.31770057489628 40.0 37.0 41.0 33.0 41.0 16 38.212049319970255 40.0 37.0 41.0 33.0 41.0 17 38.17824034834804 40.0 37.0 41.0 33.0 41.0 18 37.89320390291419 39.0 37.0 41.0 33.0 41.0 19 37.62389372344474 39.0 36.0 41.0 33.0 41.0 20 37.31654048150876 39.0 35.0 41.0 33.0 41.0 21 37.21817331295169 39.0 35.0 41.0 33.0 41.0 22 37.12460628080561 39.0 35.0 41.0 33.0 41.0 23 37.0501332857295 38.0 35.0 41.0 33.0 41.0 24 36.90402227379304 38.0 35.0 41.0 32.0 41.0 25 36.81387476691874 38.0 35.0 40.0 32.0 41.0 26 36.53534709544118 38.0 35.0 40.0 31.0 41.0 27 36.416047991863344 38.0 35.0 40.0 31.0 41.0 28 36.25693318312124 38.0 35.0 40.0 31.0 41.0 29 36.20051239124749 38.0 35.0 40.0 31.0 41.0 30 36.03118401031283 38.0 35.0 40.0 30.0 41.0 31 35.69826446028905 38.0 35.0 40.0 29.0 41.0 32 35.544486331149656 38.0 35.0 40.0 27.0 41.0 33 35.320434795001 38.0 35.0 40.0 26.0 41.0 34 35.11957462575737 38.0 35.0 40.0 24.0 41.0 35 34.89832281498661 38.0 35.0 40.0 23.0 41.0 36 34.74821498130599 38.0 34.0 40.0 23.0 41.0 37 34.61076241637452 38.0 34.0 40.0 22.0 41.0 38 34.46810518246719 38.0 34.0 40.0 21.0 41.0 39 34.33563076827684 37.0 34.0 40.0 21.0 41.0 40 34.21172929420818 37.0 34.0 40.0 20.0 41.0 41 34.09924173895999 37.0 33.0 40.0 20.0 41.0 42 33.98752699592317 37.0 33.0 40.0 20.0 41.0 43 33.81104053876337 36.0 33.0 40.0 18.0 41.0 44 33.608072699852336 36.0 33.0 40.0 18.0 41.0 45 33.399101877701156 36.0 33.0 40.0 18.0 41.0 46 33.40293218604098 36.0 33.0 40.0 18.0 41.0 47 33.35865812197882 35.0 33.0 40.0 18.0 41.0 48 33.27164136713005 35.0 33.0 40.0 18.0 41.0 49 33.22478659532092 35.0 33.0 40.0 18.0 41.0 50 33.14184566857632 35.0 33.0 40.0 18.0 41.0 51 32.737210595452936 35.0 32.0 39.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 2.0 11 8.0 12 20.0 13 27.0 14 97.0 15 155.0 16 411.0 17 966.0 18 2062.0 19 3781.0 20 6641.0 21 10721.0 22 16596.0 23 26277.0 24 41243.0 25 63319.0 26 84820.0 27 97642.0 28 99864.0 29 99504.0 30 104469.0 31 117690.0 32 140669.0 33 181782.0 34 291561.0 35 365851.0 36 413282.0 37 431246.0 38 575115.0 39 823422.0 40 431.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.437008679198676 16.760224198047943 23.18076605166716 32.622001071086224 2 34.41082007101572 19.412287689158976 26.369947780796355 19.80694445902895 3 24.131892617355696 20.638436394129727 36.943623961728925 18.286047026785656 4 22.269542698187202 23.374606655835795 34.11402117870488 20.241829467272115 5 20.59080756000858 31.566491102533757 32.0934835254238 15.74921781203387 6 77.85174206523625 1.9861348838581507 18.79136270469773 1.3707603462078697 7 73.46376383298856 7.43154823963329 17.60449216161901 1.5001957657591436 8 72.38640210536948 4.176386199089026 20.713692452242405 2.723519243299086 9 35.00441785563738 25.833079562904814 26.849136355476617 12.313366225981191 10 22.663524413715304 20.90590792558801 38.63863541015052 17.791932250546168 11 21.368295147759394 17.455530170178697 43.226279715517094 17.949894966544807 12 20.24685487181718 18.294347694989447 43.44232210692961 18.016475326263766 13 17.534936562393273 22.55046531245765 42.115465294956245 17.79913283019283 14 16.752848604312646 21.765202098768953 42.59020351138267 18.891745785535736 15 20.08066649365274 18.238593206753144 43.026663646423536 18.65407665317058 16 19.99575965865252 19.08861163323648 39.5158060223848 21.3998226857262 17 19.51929630335242 21.313965774244828 39.68786987352482 19.478868048877935 18 21.042518922773283 22.75198153451353 37.79849277866869 18.407006764044507 19 21.647167596991558 21.237534621537034 37.40428604502662 19.71101173644478 20 22.42833048060369 22.086577969526548 39.05866922287244 16.426422326997322 21 20.290258365798447 19.290902917684875 38.80509881045424 21.613739906062438 22 18.913422530513706 22.121930815430645 38.94638518400731 20.01826147004834 23 19.121089247684438 21.295589294938242 41.0436790161608 18.539642441216518 24 21.91621425524755 20.44009542768193 38.80964917675873 18.834041140311793 25 19.114613726404976 22.440406452719444 37.60147691889197 20.84350290198361 26 18.442759642151195 21.759176613717404 39.42454867616843 20.373515067962973 27 19.15776720025962 21.89976293091594 40.488984363241244 18.4534855055832 28 19.630030217432505 22.673475214754788 38.92988385565038 18.76661071216233 29 19.439589886985903 21.086897495248365 40.616644639893515 18.85686797787222 30 22.324022083777745 21.870585582139363 37.180117999498954 18.62527433458393 31 21.0825971490705 22.848614313452234 37.146190268316595 18.922598269160666 32 21.5201573726685 21.571011466423045 36.40623070157148 20.502600459336975 33 19.214396758939095 22.813061451446842 36.9741764212019 20.99836536841216 34 19.823820817575815 22.0570505925727 36.907746073558926 21.211382516292563 35 22.239565285005444 23.713758957596088 34.73044580088697 19.3162299565115 36 20.11024387463191 24.2748041217318 34.35134028289277 21.26361172074352 37 20.92400938275531 26.72550140286293 33.150543618761304 19.199945595620445 38 20.596933053110774 24.188847202199774 32.381006671037014 22.833213073652427 39 20.791348703570637 23.191066880883913 36.16496127938299 19.85262313616246 40 19.39928664257473 23.231945171586315 36.138584156024564 21.2301840298144 41 19.494494306791697 26.38239878310204 32.895423081558064 21.227683828548198 42 19.593177250768687 23.308276316243457 34.362116150350104 22.736430282637752 43 19.9306044136553 23.093108995274118 36.190513336323576 20.785773254747006 44 21.024367461580656 24.19707286436558 34.799451355834144 19.979108318219616 45 21.72467383624382 23.58599867289317 34.380417623618705 20.308909867244314 46 20.64131162558586 24.56292731564891 34.002212178080335 20.793548880684895 47 19.412787729412216 26.326719300903722 34.48947640285043 19.77101656683363 48 20.032062581037774 25.023364380832657 34.38604307646765 20.558529961661915 49 19.434689492504145 23.357230257035692 36.36675252357815 20.841327726882014 50 18.988778596677033 24.038660112139027 36.81513861865881 20.157422672525136 51 18.952850704481712 22.546990032697632 35.84696068033477 22.65319858248589 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1635.0 1 21320.0 2 41005.0 3 164191.0 4 287377.0 5 173124.0 6 58871.0 7 53414.0 8 47957.0 9 48169.5 10 48382.0 11 48046.0 12 47710.0 13 46404.5 14 45099.0 15 42482.5 16 39866.0 17 37532.0 18 35198.0 19 33108.0 20 31018.0 21 30212.5 22 29407.0 23 29776.5 24 30146.0 25 32511.0 26 39031.5 27 43187.0 28 47662.0 29 52137.0 30 57501.5 31 62866.0 32 70603.0 33 78340.0 34 85293.0 35 92246.0 36 99409.0 37 106572.0 38 112574.5 39 118577.0 40 127565.0 41 136553.0 42 149657.5 43 162762.0 44 174153.0 45 185544.0 46 202021.5 47 218499.0 48 243444.5 49 268390.0 50 258977.0 51 249564.0 52 219349.5 53 189135.0 54 183474.5 55 177814.0 56 176285.5 57 174757.0 58 174770.5 59 174784.0 60 168534.0 61 162284.0 62 154716.0 63 147148.0 64 135267.0 65 123386.0 66 104578.5 67 85771.0 68 74034.0 69 62297.0 70 55089.5 71 47882.0 72 44506.5 73 41131.0 74 35140.0 75 21762.5 76 14376.0 77 10980.5 78 7585.0 79 6043.5 80 4502.0 81 3265.0 82 2028.0 83 1503.5 84 979.0 85 725.0 86 471.0 87 374.0 88 277.0 89 166.0 90 55.0 91 53.0 92 51.0 93 36.5 94 22.0 95 15.5 96 9.0 97 4.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3999678.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.653965068901314 #Duplication Level Percentage of deduplicated Percentage of total 1 76.86024617094161 20.486303166274336 2 9.054176165173407 4.826593904684217 3 3.1007844363218107 2.4794460015574313 4 1.5817278758262772 1.6863727820312424 5 1.0372574031600517 1.382351129564365 6 0.7405505427835933 1.1843164979465883 7 0.6101269907218312 1.1383612448805494 8 0.46706766615059725 0.9959364206713024 9 0.4039520172033946 0.9690230660446352 >10 5.044993058262497 31.923721777383328 >50 0.9432902574756702 16.76114457018702 >100 0.14658101946259988 6.020510593284471 >500 0.005368875396821057 0.9414244553851099 >1k 0.0032809794091343495 1.599825316569497 >5k 1.9884723691723327E-4 0.49910733828507375 >10k+ 3.9769447383446654E-4 7.105561735250883 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 206739 5.168891095733207 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 28042 0.701106439068345 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21641 0.5410685560187595 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 11709 0.2927485662595839 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9466 0.23666905185867462 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 9368 0.23421885461779673 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 4675 0.1168844091949402 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 4658 0.11645937497968588 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 4431 0.1107839181054075 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0508040897292232 0.0 2 0.0 0.0 0.0 0.15411240604868692 0.0 3 0.0 0.0 0.0 0.25757073444412276 0.0 4 0.0 0.0 0.0 0.3303515933032609 0.0 5 0.0 0.0 0.0 0.6900055454464085 0.0 6 0.0 0.0 0.0 0.8663947447769546 0.0 7 0.0 0.0 0.0 1.2577012449502185 0.0 8 0.0 0.0 0.0 1.6274810122214838 0.0 9 0.0 0.0 0.0 1.989435149529537 0.0 10 0.0 0.0 0.0 2.2080777502588957 0.0 11 0.0 0.0 0.0 2.4419715787120864 0.0 12 0.0 0.0 0.0 2.640112529058589 0.0 13 0.0 0.0 0.0 2.7386704629722693 0.0 14 0.0 0.0 0.0 2.8103262312616164 0.0 15 0.0 0.0 0.0 2.999966497303033 0.0 16 0.0 0.0 0.0 3.220259230868085 0.0 17 2.5002012662019293E-5 0.0 0.0 3.4972065251252724 0.0 18 2.5002012662019293E-5 0.0 0.0 3.6513939372119455 0.0 19 2.5002012662019293E-5 0.0 0.0 3.8340086376953346 0.0 20 2.5002012662019293E-5 0.0 0.0 4.030299439104848 0.0 21 2.5002012662019293E-5 0.0 0.0 4.23226569738864 0.0 22 7.500603798605788E-5 0.0 0.0 4.4521834007637615 0.0 23 7.500603798605788E-5 0.0 0.0 4.643798825805478 0.0 24 1.0000805064807717E-4 0.0 0.0 4.808062048994944 0.0 25 1.2501006331009647E-4 0.0 0.0 4.964349630145227 0.0 26 1.2501006331009647E-4 0.0 0.0 5.14268898646341 0.0 27 1.2501006331009647E-4 0.0 0.0 5.3322542464668405 0.0 28 1.5001207597211576E-4 0.0 0.0 5.531120255180542 0.0 29 1.7501408863413505E-4 0.0 0.0 5.741837217896041 0.0 30 1.7501408863413505E-4 0.0 0.0 5.9550793838904035 0.0 31 1.7501408863413505E-4 0.0 0.0 6.162746101061136 0.0 32 1.7501408863413505E-4 0.0 0.0 6.385314017778431 0.0 33 1.7501408863413505E-4 0.0 0.0 6.604156634609086 0.0 34 1.7501408863413505E-4 0.0 0.0 6.858802133571753 0.0 35 1.7501408863413505E-4 0.0 0.0 7.08424528174518 0.0 36 1.7501408863413505E-4 0.0 0.0 7.334240406352712 0.0 37 1.7501408863413505E-4 0.0 0.0 7.590586042176395 0.0 38 1.7501408863413505E-4 0.0 0.0 7.855757388469772 0.0 39 1.7501408863413505E-4 0.0 0.0 8.162107049617495 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 52915 0.0 43.919964 1 CGACGGT 1160 0.0 42.86638 27 CGGTCTA 1205 0.0 41.265556 30 ACTACGG 240 0.0 41.249996 1 TCACGAC 1230 0.0 40.97561 24 CGTTTTA 2905 0.0 40.817554 1 CGCACTT 9225 0.0 40.78049 34 CACTTAC 9310 0.0 40.529 36 GCACTTA 9300 0.0 40.475807 35 ACTTACT 9270 0.0 40.26699 37 CCGCACT 9355 0.0 40.26189 33 CACGACG 1250 0.0 40.140003 25 CCCGCAC 9460 0.0 40.10042 32 TACGGGA 1320 0.0 40.056816 3 ACCCGCA 9445 0.0 39.925884 31 ACGGGAT 1510 0.0 39.63576 4 CTTACTG 9400 0.0 39.56649 38 TCAACGC 9940 0.0 39.295773 15 CTTATGA 9805 0.0 39.12545 25 CAACGCA 10000 0.0 39.037502 16 >>END_MODULE