##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043482_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4215184 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.549493687582796 31.0 31.0 33.0 30.0 34.0 2 30.565145198880998 31.0 31.0 34.0 26.0 34.0 3 31.581838894814556 31.0 31.0 34.0 28.0 34.0 4 35.194272895323195 37.0 35.0 37.0 33.0 37.0 5 35.529105016530714 37.0 35.0 37.0 33.0 37.0 6 35.75473312671523 37.0 35.0 37.0 35.0 37.0 7 33.63631670645931 37.0 35.0 37.0 31.0 37.0 8 34.682208416050166 37.0 35.0 37.0 31.0 37.0 9 36.75292039445965 39.0 37.0 39.0 32.0 39.0 10 36.766644113281885 39.0 35.0 39.0 32.0 39.0 11 36.6702260209756 39.0 35.0 39.0 33.0 39.0 12 36.67737043032997 39.0 35.0 39.0 33.0 39.0 13 36.71439372516123 39.0 35.0 39.0 33.0 39.0 14 38.013165024350066 40.0 36.0 41.0 33.0 41.0 15 38.092384579178514 40.0 36.0 41.0 33.0 41.0 16 37.95257763362169 40.0 36.0 41.0 33.0 41.0 17 37.92765345474836 40.0 36.0 41.0 33.0 41.0 18 37.759270057961885 39.0 36.0 41.0 33.0 41.0 19 37.59219882216292 39.0 36.0 41.0 33.0 41.0 20 37.390797175164835 39.0 35.0 41.0 33.0 41.0 21 37.286475038812064 39.0 35.0 41.0 33.0 41.0 22 37.20499437272489 39.0 35.0 41.0 32.0 41.0 23 37.1362313009349 39.0 35.0 41.0 32.0 41.0 24 37.01450423042031 39.0 35.0 41.0 32.0 41.0 25 36.919817023408704 38.0 35.0 41.0 32.0 41.0 26 36.65588928027815 38.0 35.0 40.0 31.0 41.0 27 36.54273716165178 38.0 35.0 40.0 31.0 41.0 28 36.35736826672335 38.0 35.0 40.0 31.0 41.0 29 36.32715487627586 38.0 35.0 40.0 31.0 41.0 30 36.200419483467385 38.0 35.0 40.0 30.0 41.0 31 36.05483177009592 38.0 35.0 40.0 30.0 41.0 32 36.02977924569841 38.0 35.0 40.0 30.0 41.0 33 35.870769816928515 38.0 35.0 40.0 29.0 41.0 34 35.801013431442136 38.0 35.0 40.0 29.0 41.0 35 35.65290744128845 38.0 35.0 40.0 29.0 41.0 36 35.52402220164055 38.0 35.0 40.0 28.0 41.0 37 35.41435984763655 38.0 35.0 40.0 28.0 41.0 38 35.27117772320259 37.0 35.0 40.0 27.0 41.0 39 35.12866413423471 37.0 34.0 40.0 26.0 41.0 40 35.01968882022707 37.0 34.0 40.0 26.0 41.0 41 34.920350570698695 37.0 34.0 40.0 26.0 41.0 42 34.81161629005994 36.0 34.0 40.0 26.0 41.0 43 34.63913912180346 36.0 34.0 40.0 25.0 41.0 44 34.40079151942122 36.0 34.0 40.0 24.0 41.0 45 34.18318583482951 35.0 33.0 40.0 23.0 41.0 46 34.16607626143959 35.0 33.0 40.0 23.0 41.0 47 34.10202970973509 35.0 33.0 40.0 23.0 41.0 48 34.00237071501505 35.0 33.0 40.0 23.0 41.0 49 33.960797440870905 35.0 33.0 39.0 24.0 41.0 50 33.891517428420684 35.0 33.0 39.0 24.0 41.0 51 33.450932391088976 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 4.0 11 11.0 12 20.0 13 26.0 14 79.0 15 193.0 16 386.0 17 803.0 18 1613.0 19 3033.0 20 5294.0 21 8741.0 22 13732.0 23 20413.0 24 31332.0 25 46176.0 26 62168.0 27 74680.0 28 83114.0 29 92035.0 30 104217.0 31 125064.0 32 154062.0 33 206385.0 34 355096.0 35 421706.0 36 441138.0 37 512812.0 38 641444.0 39 808860.0 40 544.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.26008639243269 17.869563938371375 24.094203242373286 25.77614642682265 2 30.681697406329118 21.465183963499577 27.738812825252708 20.1143058049186 3 28.696659505255283 21.64292234929721 29.921540791576355 19.73887735387115 4 24.18943040208921 25.27166073889064 26.65912093042676 23.87978792859339 5 21.921130845059196 35.59958473936132 25.465768516866643 17.013515898712843 6 84.78846949504458 2.4604382631932555 11.24586732156888 1.5052249201932821 7 79.84600434998804 7.90036686417485 10.669285136781692 1.5843436490554148 8 78.85271437735577 4.444764451563681 13.39701896761802 3.30550220346253 9 43.74475704975156 20.651672619748034 19.834792502533695 15.768777827966703 10 28.01775675747488 19.306108582685834 28.00890779619585 24.66722686364344 11 24.388899749097547 16.191724963844994 38.49238846987462 20.926986817182833 12 20.925065192883633 19.06365178839168 38.96318642317868 21.048096595546006 13 18.308880466428036 24.194886866148664 38.255459310910275 19.240773356513024 14 17.449534824577054 20.673332409688403 39.24817991337982 22.628952852354725 15 21.380537599307644 15.329959498802426 39.96802986536294 23.321473036526992 16 22.51621756013498 16.794118596009096 32.933058201018035 27.756605642837894 17 22.649094321861156 21.38181868217378 32.35455439193164 23.614532604033418 18 24.483462643623625 23.48381470417424 29.65175422947136 22.380968422730778 19 25.92567726580856 19.983445562518742 29.350509965875748 24.740367205796947 20 27.344286749997153 21.316720693568776 31.676102395530066 19.66289016090401 21 24.2397722139769 18.269522753929603 31.091786266032518 26.398918766060987 22 23.44630744470467 22.1533152526675 30.71272808019769 23.68764922243015 23 24.086374402635805 21.718838370994007 33.0936917581771 21.101095468193083 24 27.71290648284867 18.339128256322855 31.252301204407683 22.695664056420785 25 21.668235597781734 21.266948251843807 30.041772790938666 27.023043359435796 26 20.594925393529678 20.860489126927792 33.71345118030435 24.831134299238183 27 22.635619228009976 21.32758617417413 34.165934393374044 21.870860204441847 28 22.846736939597417 23.40377074879768 31.313176364305807 22.4363159472991 29 22.573012233866898 20.592956321716915 34.72659793736169 22.1074335070545 30 28.448485285577096 21.62524815049592 28.964168586709384 20.962097977217603 31 26.220326325019265 23.02563778947728 28.884883791549786 21.869152093953666 32 27.119124574395805 20.536256543012122 27.710700173468112 24.633918709123968 33 22.971168043909827 22.97233050799206 29.97024566424621 24.086255783851904 34 23.624923609503167 21.802535784914728 29.430079446116707 25.1424611594654 35 28.61535819076937 23.223209235943198 27.37655105921829 20.784881514069138 36 24.292865981651097 24.057051839255415 27.14837596650585 24.501706212587635 37 25.041136994256952 27.390809037043223 25.611669621065175 21.956384347634646 38 23.39508785381611 23.510314140497783 26.250075916021697 26.844522089664412 39 23.570477587692494 21.72199363064578 31.802146715303532 22.905382066358197 40 22.12427737436847 21.62811872506633 31.70151053904171 24.546093361523482 41 22.10952119765116 26.670864190032983 26.768961924319317 24.450652687996538 42 21.614335222377008 21.969835717729048 28.753240665176182 27.662588394717762 43 23.112609081833675 21.180403987109457 32.5631336615436 23.143853269513265 44 24.77384142661388 23.705560658799236 29.010714597512234 22.509883317074653 45 26.39028331859297 22.84412732635159 29.247216728854543 21.518372626200897 46 24.620467339029563 23.28311172181333 28.654858245808484 23.441562693348615 47 21.940916458213923 27.441411810255495 29.25089391115548 21.366777820375102 48 23.36659562192303 26.132216292337418 28.790676753375415 21.71051133236414 49 22.072796822155333 22.601884045868463 31.778589024820743 23.546730107155465 50 21.518396349957676 23.937318038785495 32.22181997274615 22.32246563851068 51 21.378188947386402 21.139029755284707 31.111975183052508 26.370806114276384 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2016.0 1 15554.0 2 29092.0 3 94467.5 4 159843.0 5 96235.5 6 32628.0 7 29961.5 8 27295.0 9 27672.0 10 28049.0 11 28039.5 12 28030.0 13 26787.0 14 25544.0 15 23770.5 16 21997.0 17 20668.0 18 19339.0 19 18119.0 20 16899.0 21 16191.0 22 15483.0 23 15906.0 24 16329.0 25 17750.0 26 21809.0 27 24447.0 28 27426.5 29 30406.0 30 34735.0 31 39064.0 32 45976.5 33 52889.0 34 62033.0 35 71177.0 36 73897.5 37 76618.0 38 84464.0 39 92310.0 40 103574.5 41 114839.0 42 134924.5 43 155010.0 44 171586.0 45 188162.0 46 203982.0 47 219802.0 48 255697.0 49 291592.0 50 278708.5 51 265825.0 52 238429.5 53 211034.0 54 216576.0 55 222118.0 56 234023.5 57 245929.0 58 253397.5 59 260866.0 60 255278.5 61 249691.0 62 244194.5 63 238698.0 64 220389.5 65 202081.0 66 173986.0 67 145891.0 68 128450.5 69 111010.0 70 96316.0 71 81622.0 72 79169.5 73 76717.0 74 64063.5 75 39136.5 76 26863.0 77 20585.0 78 14307.0 79 10821.5 80 7336.0 81 5377.0 82 3418.0 83 2388.0 84 1358.0 85 994.0 86 630.0 87 395.0 88 160.0 89 128.5 90 97.0 91 78.5 92 60.0 93 41.5 94 23.0 95 15.0 96 7.0 97 4.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4215184.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.890734126655587 #Duplication Level Percentage of deduplicated Percentage of total 1 77.48236425426524 16.18663471140538 2 9.91494113427118 4.142607982350004 3 3.1232833299971716 1.9574304494755925 4 1.4853873018023205 1.2412332478825039 5 0.8598495023009165 0.8981443670752789 6 0.5640827919402417 0.7070462179107102 7 0.42677383675470265 0.6240933129098646 8 0.33706839442224745 0.563328496829908 9 0.2457354367335663 0.4620234306868675 >10 3.1960193737571236 16.667697344839617 >50 1.5686213889500435 23.744724474243696 >100 0.7819694591498813 23.437479255622257 >500 0.008489928320548715 1.2397265342707537 >1k 0.004183442940560231 1.6088684119125167 >5k 4.921697577129684E-4 0.6977992167913772 >10k+ 7.382546365694525E-4 5.821162545793614 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 112737 2.674545168135009 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 50964 1.209057540548645 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 22389 0.5311511905530103 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 16863 0.4000537105853505 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12794 0.3035217442465145 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 10718 0.25427122517071615 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 9007 0.21367987731970894 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 7948 0.18855641888942454 No Hit TTACTGGGAATTCCTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCAT 5185 0.12300767890559464 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5007 0.11878485019871018 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03226430922113958 0.0 2 0.0 0.0 0.0 0.10718393313316808 0.0 3 0.0 0.0 0.0 0.17301735819836098 0.0 4 0.0 0.0 0.0 0.2167639657011414 0.0 5 0.0 0.0 0.0 0.4828970692619824 0.0 6 0.0 0.0 0.0 0.5612803616639274 0.0 7 0.0 0.0 0.0 0.7859680621296722 0.0 8 0.0 0.0 0.0 1.0284011326670437 0.0 9 0.0 0.0 0.0 1.2362449658188113 0.0 10 0.0 0.0 0.0 1.3901646998090713 0.0 11 0.0 0.0 0.0 1.559457428192933 0.0 12 0.0 0.0 0.0 1.7015390075498484 0.0 13 0.0 0.0 0.0 1.7719748414304097 0.0 14 0.0 0.0 0.0 1.8215812168579117 0.0 15 0.0 0.0 0.0 1.9940292048935468 0.0 16 0.0 0.0 0.0 2.194732187254459 0.0 17 0.0 0.0 0.0 2.452799213510015 2.372375678024969E-5 18 0.0 0.0 0.0 2.593979290109281 2.372375678024969E-5 19 0.0 0.0 0.0 2.752738670482712 2.372375678024969E-5 20 0.0 0.0 0.0 2.932588470633785 2.372375678024969E-5 21 0.0 0.0 0.0 3.119863806657076 2.372375678024969E-5 22 0.0 0.0 0.0 3.31501542993141 2.372375678024969E-5 23 0.0 0.0 0.0 3.4820306776643677 2.372375678024969E-5 24 2.372375678024969E-5 0.0 0.0 3.6253696161306364 2.372375678024969E-5 25 4.744751356049938E-5 0.0 0.0 3.7722196706003817 2.372375678024969E-5 26 4.744751356049938E-5 0.0 0.0 3.9287727415932494 2.372375678024969E-5 27 4.744751356049938E-5 0.0 0.0 4.1063450610934185 2.372375678024969E-5 28 4.744751356049938E-5 0.0 0.0 4.284510474513094 2.372375678024969E-5 29 4.744751356049938E-5 0.0 0.0 4.470006528777866 2.372375678024969E-5 30 4.744751356049938E-5 0.0 0.0 4.663544936591143 2.372375678024969E-5 31 4.744751356049938E-5 0.0 0.0 4.848708858260991 2.372375678024969E-5 32 4.744751356049938E-5 0.0 0.0 5.067513067045234 2.372375678024969E-5 33 4.744751356049938E-5 0.0 0.0 5.270754491381633 2.372375678024969E-5 34 4.744751356049938E-5 0.0 0.0 5.536270777266188 2.372375678024969E-5 35 4.744751356049938E-5 0.0 0.0 5.744423019256099 2.372375678024969E-5 36 4.744751356049938E-5 0.0 0.0 5.969608918614229 2.372375678024969E-5 37 4.744751356049938E-5 0.0 0.0 6.211116762637171 2.372375678024969E-5 38 4.744751356049938E-5 0.0 0.0 6.476300915926802 2.372375678024969E-5 39 4.744751356049938E-5 0.0 0.0 6.776904638089346 2.372375678024969E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATTACG 25 3.8925828E-5 45.0 24 CGTTTTT 28815 0.0 43.60229 1 CGGTCTA 1535 0.0 42.068405 30 ATTGCGG 780 0.0 41.25 1 TACGGGA 570 0.0 41.05263 3 CGACGGT 1575 0.0 41.0 27 CACGACG 1605 0.0 40.93458 25 TCACGAC 1625 0.0 40.846157 24 TACGCGG 405 0.0 40.555553 1 TATCGTT 50 1.0822987E-9 40.5 45 CACTTAC 16710 0.0 40.48923 36 CGCACTT 16755 0.0 40.353626 34 GCACTTA 16770 0.0 40.344364 35 ACTTACT 16715 0.0 40.315586 37 CTTACTG 16695 0.0 40.28302 38 GCGCGAC 5830 0.0 40.02144 8 GCGATAT 135 0.0 40.0 8 ACGTAGG 355 0.0 39.929577 1 ACCCGCA 16975 0.0 39.857143 31 CCGCACT 17000 0.0 39.732353 33 >>END_MODULE