SRR1043472_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1043472_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3166475
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	105513	3.3321911589385675	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC	22061	0.6967053269013651	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11663	0.36832755666790357	No Hit
GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC	8805	0.2780694620990218	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC	7407	0.233919421438666	No Hit
CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA	5056	0.1596728223024025	No Hit
TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC	4714	0.1488721685786245	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4591	0.14498772294112539	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC	3558	0.11236469575790113	No Hit
GGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAG	3214	0.10150088031644021	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACGAC	20	7.0351636E-4	45.000004	45
TATACGG	225	0.0	45.0	1
CGTTAGA	30	2.1667147E-6	44.999996	29
CGTTTTT	28800	0.0	44.015625	1
ATAGCGG	440	0.0	42.954544	1
GCGATCG	105	0.0	42.857143	8
ATTACGG	225	0.0	42.0	1
CACTTAC	7235	0.0	40.863857	36
CATGCGG	550	0.0	40.5	1
GCGCGAC	3490	0.0	40.422634	8
GCACTTA	7350	0.0	40.010204	35
ACTTACT	7320	0.0	39.95902	37
CGCACTT	7380	0.0	39.939022	34
CTTACTG	7315	0.0	39.924812	38
CATATGC	1270	0.0	39.862206	32
ACCCGCA	7445	0.0	39.74144	31
CCGCACT	7440	0.0	39.70766	33
AATACGG	85	0.0	39.705883	1
TATGCGG	550	0.0	39.68182	1
CCCGCAC	7525	0.0	39.52824	32