##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043472_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3166475 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.498200680567507 31.0 31.0 33.0 30.0 34.0 2 30.53011124357527 31.0 31.0 34.0 26.0 34.0 3 31.494633306752778 31.0 31.0 34.0 28.0 34.0 4 35.11075596680852 37.0 35.0 37.0 32.0 37.0 5 35.42221113383179 37.0 35.0 37.0 33.0 37.0 6 35.748364348368455 37.0 35.0 37.0 35.0 37.0 7 33.71604007610987 37.0 35.0 37.0 32.0 37.0 8 34.707628514357445 37.0 35.0 37.0 31.0 37.0 9 36.73188545622498 39.0 37.0 39.0 32.0 39.0 10 36.658467538824716 39.0 35.0 39.0 32.0 39.0 11 36.18864289154344 38.0 35.0 39.0 32.0 39.0 12 36.121797266676666 38.0 35.0 39.0 32.0 39.0 13 36.1194056482366 38.0 35.0 39.0 32.0 39.0 14 37.244928508830796 39.0 35.0 41.0 32.0 41.0 15 37.30301834058377 39.0 35.0 41.0 32.0 41.0 16 37.016026022627685 39.0 35.0 41.0 31.0 41.0 17 36.94894196227666 39.0 35.0 41.0 31.0 41.0 18 36.84869484205623 39.0 35.0 40.0 31.0 41.0 19 36.73508965016303 38.0 35.0 40.0 31.0 41.0 20 36.53221547619987 38.0 35.0 40.0 31.0 41.0 21 36.443205772980996 38.0 35.0 40.0 31.0 41.0 22 36.39965892672451 37.0 35.0 40.0 31.0 41.0 23 36.38569576579635 37.0 35.0 40.0 31.0 41.0 24 36.29039547130484 37.0 35.0 40.0 31.0 41.0 25 36.16520957847449 37.0 35.0 40.0 31.0 41.0 26 35.88979732983839 36.0 35.0 40.0 30.0 41.0 27 35.77886166794306 36.0 35.0 40.0 30.0 41.0 28 35.61961676627796 36.0 34.0 40.0 30.0 41.0 29 35.42756819491706 36.0 34.0 40.0 29.0 41.0 30 35.25404084984091 36.0 34.0 40.0 29.0 41.0 31 35.108384244309526 36.0 34.0 40.0 28.0 41.0 32 35.02778041828847 36.0 34.0 40.0 27.0 41.0 33 34.71226521605255 36.0 33.0 40.0 25.0 41.0 34 34.61291751869192 36.0 33.0 40.0 24.0 41.0 35 34.55422133444919 36.0 34.0 40.0 24.0 41.0 36 34.523226616347834 36.0 34.0 40.0 24.0 41.0 37 34.437893872523865 35.0 34.0 40.0 24.0 41.0 38 34.33807625198367 35.0 34.0 40.0 23.0 41.0 39 34.22945862512731 35.0 34.0 40.0 23.0 41.0 40 34.15450366732723 35.0 34.0 40.0 23.0 41.0 41 34.07073133373862 35.0 33.0 40.0 23.0 41.0 42 33.95231321895799 35.0 33.0 40.0 23.0 41.0 43 33.76897212199686 35.0 33.0 40.0 23.0 41.0 44 33.53406516710222 35.0 33.0 40.0 22.0 41.0 45 33.31396268721528 35.0 33.0 39.0 20.0 41.0 46 33.31999684191412 35.0 33.0 39.0 21.0 41.0 47 33.31579564026244 35.0 33.0 39.0 22.0 41.0 48 33.22710995665527 35.0 33.0 39.0 22.0 41.0 49 33.1927354550407 35.0 33.0 39.0 22.0 41.0 50 33.14332688557465 35.0 33.0 39.0 22.0 41.0 51 32.732219581711526 35.0 32.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 12.0 12 21.0 13 45.0 14 87.0 15 186.0 16 429.0 17 971.0 18 1980.0 19 3707.0 20 5820.0 21 9463.0 22 14171.0 23 20896.0 24 30785.0 25 44718.0 26 58443.0 27 70787.0 28 79981.0 29 88033.0 30 99755.0 31 115860.0 32 138929.0 33 183155.0 34 355459.0 35 343476.0 36 292122.0 37 317078.0 38 394658.0 39 495202.0 40 240.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.754379870360577 17.516544422425568 24.26344752445543 28.46562818275843 2 31.203246512288903 20.93078265263424 28.240046108053907 19.62592472702295 3 26.51402584893296 21.304794763893604 33.13141584885401 19.049763538319425 4 24.145208788953017 24.581245706977 29.393315911226203 21.88022959284378 5 21.404274469244193 32.938109411885456 28.45688028485935 17.200735834011006 6 82.08042065703977 2.358521699997631 14.106790674172384 1.454266968790216 7 78.07928374612148 7.323885393063264 13.001839585027513 1.5949912757877451 8 77.11341475931438 3.590301518249789 16.184432215634104 3.1118515068017274 9 48.63692276111449 16.810333257012925 21.193535398195156 13.359208583677434 10 36.76318303476263 16.52998997307732 28.036412730244198 18.67041426191585 11 33.321753685091466 14.362027175329034 34.81192809038442 17.504291049195082 12 25.42154919903047 16.732865410274833 35.57432160367601 22.27126378701869 13 19.264008084699864 19.295746847835527 41.07141221705524 20.368832850409365 14 22.700889790697858 17.01952486597873 41.23237985457015 19.047205488753267 15 29.57793761201336 14.353310858288793 37.68180705674291 18.38694447295494 16 26.088473776044342 16.173536819333805 35.695939491074455 22.042049913547398 17 26.486392597446688 18.940525347586828 35.43896604268153 19.134116012284956 18 26.473286541027484 24.937698860720516 31.030688699579184 17.558325898672813 19 29.12756298407535 22.893027735889277 29.390726280801204 18.588682999234162 20 27.917700281859165 25.538745766191113 31.278377375472726 15.265176576476996 21 22.379017677385736 20.750519110367208 36.474376080657514 20.396087131589542 22 26.12753929843122 19.39664769183398 35.096566371122464 19.379246638612337 23 30.040060319440386 18.098548070014765 33.6834808422615 18.177910768283343 24 28.144956142082282 16.009916389676217 31.046100158693818 24.799027309547682 25 20.158567492242952 18.475876171452484 35.559699666032415 25.80585667027215 26 17.934832897780655 18.723091134463402 36.75377193882788 26.588304028928068 27 19.587427660095216 23.925563915710686 33.864502325140734 22.622506099053364 28 25.146479918521386 24.044181621519197 30.888069541051166 19.92126891890825 29 24.50093558294318 20.090731807451505 36.49165081044379 18.916681799161527 30 30.91071301684049 18.410819602239084 32.739276324619645 17.93919105630078 31 32.1886956315777 19.333707040162956 30.12558128518305 18.35201604307629 32 31.434639465020254 19.327106640665093 29.43462367459083 19.803630219723825 33 23.770944030822918 21.180176694905217 35.60849209294247 19.440387181329395 34 21.53764043613166 25.593980688304818 33.30687910057714 19.56149977498638 35 23.167560141798056 30.804001294815215 27.825736820912844 18.202701742473888 36 25.99114156909497 27.511980988322975 26.472023306673826 20.024854135908228 37 24.701758264316 31.045121152069733 25.46636243772649 18.786758145887777 38 25.908115491200785 25.824931509012387 25.746295170497163 22.520657829289668 39 24.166241640941426 20.9993131163202 29.31556383675854 25.518881405979837 40 20.161946644138986 23.878540016895762 29.61466615084597 26.34484718811928 41 19.223900393971213 25.876913602665425 26.689141711208837 28.210044292154524 42 19.003623903552057 19.90197301415612 29.291815030909767 31.80258805138206 43 20.551180729359935 19.434481560726045 31.505538493119325 28.5087992167947 44 24.128091963460946 22.428378559754933 29.70416630480266 23.739363171981463 45 23.951397058243 23.876297775918015 30.691447113904264 21.480858051934725 46 20.422930861604783 23.73759464388634 30.447737626224747 25.39173686828413 47 19.966271642757324 23.114630622379774 33.92336904602121 22.995728688841695 48 24.765993731199522 21.667690412840777 32.3659589922548 21.200356863704908 49 21.473373388389298 20.17142090179142 33.96319250902028 24.392013200798996 50 18.672277532587497 21.38276790437316 36.447248122912704 23.49770644012664 51 18.262800116849178 18.917060769467625 35.5229711271998 27.297167986483394 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1783.0 1 15710.0 2 29637.0 3 102357.0 4 175077.0 5 104868.0 6 34659.0 7 29551.5 8 24444.0 9 23856.5 10 23269.0 11 22782.5 12 22296.0 13 21221.0 14 20146.0 15 18721.5 16 17297.0 17 15990.5 18 14684.0 19 14024.5 20 13365.0 21 13084.0 22 12803.0 23 12482.5 24 12162.0 25 12450.5 26 15658.0 27 18577.0 28 20181.0 29 21785.0 30 24134.0 31 26483.0 32 30149.5 33 33816.0 34 39428.5 35 45041.0 36 49041.0 37 53041.0 38 56465.5 39 59890.0 40 65887.5 41 71885.0 42 82795.5 43 93706.0 44 102299.0 45 110892.0 46 119452.0 47 128012.0 48 150381.5 49 172751.0 50 174474.5 51 176198.0 52 167768.0 53 159338.0 54 167991.0 55 176644.0 56 192869.5 57 209095.0 58 220064.5 59 231034.0 60 236594.0 61 242154.0 62 233210.5 63 224267.0 64 199689.0 65 175111.0 66 144108.5 67 113106.0 68 90349.5 69 67593.0 70 57790.0 71 47987.0 72 43985.5 73 39984.0 74 33568.0 75 20416.0 76 13680.0 77 10327.0 78 6974.0 79 5231.0 80 3488.0 81 2454.0 82 1420.0 83 985.0 84 550.0 85 406.5 86 263.0 87 181.0 88 99.0 89 74.5 90 50.0 91 35.0 92 20.0 93 17.5 94 15.0 95 11.5 96 8.0 97 6.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3166475.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.11812500277322 #Duplication Level Percentage of deduplicated Percentage of total 1 77.24633796311448 19.40283172963976 2 9.336198013468612 4.690155775058953 3 3.135429256744597 2.3626831202478935 4 1.4310979277628573 1.4378598656302868 5 0.8224671806483865 1.0329416727102316 6 0.5846478083565324 0.8811154039738068 7 0.4615087718058857 0.8114564514067604 8 0.36279560184223414 0.7290196222023664 9 0.3128930295034154 0.7073357604806878 >10 4.843190343979679 30.189758991347443 >50 1.2111755600245144 20.53967230384182 >100 0.24322731690169805 9.394349194607198 >500 0.005391776625169041 0.9976548133142535 >1k 0.0028306827282137464 1.3888143211612491 >5k 4.043832468876781E-4 0.7200883244949279 >10k+ 4.043832468876781E-4 4.714262649882466 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 105513 3.3321911589385675 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 22061 0.6967053269013651 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11663 0.36832755666790357 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 8805 0.2780694620990218 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 7407 0.233919421438666 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 5056 0.1596728223024025 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 4714 0.1488721685786245 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4591 0.14498772294112539 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3558 0.11236469575790113 No Hit GGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAG 3214 0.10150088031644021 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04699231795608681 0.0 2 0.0 0.0 0.0 0.14985117520270963 0.0 3 0.0 0.0 0.0 0.22555049384568013 0.0 4 0.0 0.0 0.0 0.2770272937572537 0.0 5 0.0 0.0 0.0 0.5955518360321809 0.0 6 0.0 0.0 0.0 0.6938314687467926 0.0 7 0.0 0.0 0.0 0.9920810996455048 0.0 8 0.0 0.0 0.0 1.3632509336091394 0.0 9 0.0 0.0 0.0 1.685944149251139 0.0 10 0.0 0.0 0.0 1.91086302591999 0.0 11 0.0 0.0 0.0 2.1365714240598774 0.0 12 0.0 0.0 0.0 2.324161725578127 0.0 13 6.316171768291238E-5 0.0 0.0 2.4204201833268857 0.0 14 6.316171768291238E-5 0.0 0.0 2.492235056332357 0.0 15 6.316171768291238E-5 0.0 0.0 2.693184061140543 0.0 16 6.316171768291238E-5 0.0 0.0 2.9167449608792113 3.158085884145619E-5 17 6.316171768291238E-5 0.0 0.0 3.204793974372133 3.158085884145619E-5 18 6.316171768291238E-5 0.0 0.0 3.386320750992823 3.158085884145619E-5 19 6.316171768291238E-5 0.0 0.0 3.59835463725436 3.158085884145619E-5 20 6.316171768291238E-5 0.0 0.0 3.8264000189485152 3.158085884145619E-5 21 6.316171768291238E-5 0.0 0.0 4.052929519418281 3.158085884145619E-5 22 6.316171768291238E-5 0.0 0.0 4.2679320064109145 3.158085884145619E-5 23 6.316171768291238E-5 0.0 0.0 4.482681846532817 3.158085884145619E-5 24 1.2632343536582476E-4 0.0 0.0 4.671314316392834 3.158085884145619E-5 25 1.2632343536582476E-4 0.0 0.0 4.860041528829377 3.158085884145619E-5 26 1.2632343536582476E-4 0.0 0.0 5.047505506912261 3.158085884145619E-5 27 1.2632343536582476E-4 0.0 0.0 5.264308102858857 3.158085884145619E-5 28 1.2632343536582476E-4 0.0 0.0 5.47820525979204 3.158085884145619E-5 29 1.2632343536582476E-4 0.0 0.0 5.700913476341989 3.158085884145619E-5 30 1.2632343536582476E-4 0.0 0.0 5.923969082339195 3.158085884145619E-5 31 1.2632343536582476E-4 0.0 0.0 6.154319866728776 3.158085884145619E-5 32 1.2632343536582476E-4 0.0 0.0 6.435421091276577 3.158085884145619E-5 33 1.2632343536582476E-4 0.0 0.0 6.70332151682865 3.158085884145619E-5 34 1.2632343536582476E-4 0.0 0.0 6.984106932788037 3.158085884145619E-5 35 1.2632343536582476E-4 0.0 0.0 7.250902028280659 3.158085884145619E-5 36 1.2632343536582476E-4 0.0 0.0 7.532445384852241 3.158085884145619E-5 37 1.8948515304873716E-4 0.0 0.0 7.956639480810681 3.158085884145619E-5 38 1.8948515304873716E-4 0.0 0.0 8.384023243512107 3.158085884145619E-5 39 1.8948515304873716E-4 0.0 0.0 8.943793966476917 3.158085884145619E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACGAC 20 7.0351636E-4 45.000004 45 TATACGG 225 0.0 45.0 1 CGTTAGA 30 2.1667147E-6 44.999996 29 CGTTTTT 28800 0.0 44.015625 1 ATAGCGG 440 0.0 42.954544 1 GCGATCG 105 0.0 42.857143 8 ATTACGG 225 0.0 42.0 1 CACTTAC 7235 0.0 40.863857 36 CATGCGG 550 0.0 40.5 1 GCGCGAC 3490 0.0 40.422634 8 GCACTTA 7350 0.0 40.010204 35 ACTTACT 7320 0.0 39.95902 37 CGCACTT 7380 0.0 39.939022 34 CTTACTG 7315 0.0 39.924812 38 CATATGC 1270 0.0 39.862206 32 ACCCGCA 7445 0.0 39.74144 31 CCGCACT 7440 0.0 39.70766 33 AATACGG 85 0.0 39.705883 1 TATGCGG 550 0.0 39.68182 1 CCCGCAC 7525 0.0 39.52824 32 >>END_MODULE