##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043470_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1053654 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.51145157708318 31.0 31.0 33.0 30.0 34.0 2 30.555395794065223 31.0 31.0 34.0 26.0 34.0 3 31.455341127163187 31.0 31.0 34.0 28.0 34.0 4 35.07611511938454 37.0 35.0 37.0 32.0 37.0 5 35.396466012562 37.0 35.0 37.0 33.0 37.0 6 35.81835213457169 37.0 35.0 37.0 35.0 37.0 7 33.799951407198186 37.0 35.0 37.0 32.0 37.0 8 34.80356075144213 37.0 35.0 37.0 32.0 37.0 9 36.80052654856338 39.0 37.0 39.0 32.0 39.0 10 36.73548527315418 39.0 35.0 39.0 32.0 39.0 11 36.4562152281489 39.0 35.0 39.0 32.0 39.0 12 36.397665647356725 39.0 35.0 39.0 32.0 39.0 13 36.443109407832175 39.0 35.0 39.0 32.0 39.0 14 37.79348343953518 40.0 36.0 41.0 33.0 41.0 15 37.94144092842622 40.0 36.0 41.0 33.0 41.0 16 37.90908021039164 40.0 36.0 41.0 33.0 41.0 17 37.854760670960296 40.0 36.0 41.0 33.0 41.0 18 37.53338002797882 39.0 36.0 41.0 33.0 41.0 19 37.17519793025035 38.0 35.0 41.0 33.0 41.0 20 36.819968414678826 38.0 35.0 40.0 32.0 41.0 21 36.71687385042908 38.0 35.0 40.0 32.0 41.0 22 36.616261125568734 38.0 35.0 40.0 32.0 41.0 23 36.53317787433066 37.0 35.0 40.0 32.0 41.0 24 36.35040155496966 37.0 35.0 40.0 32.0 41.0 25 36.24267928560989 36.0 35.0 40.0 32.0 41.0 26 35.96427954527767 36.0 35.0 40.0 31.0 41.0 27 35.84064028609012 36.0 35.0 40.0 31.0 41.0 28 35.7213003509691 36.0 35.0 40.0 31.0 41.0 29 35.63544389334639 36.0 35.0 40.0 30.0 41.0 30 35.43542092565491 35.0 35.0 40.0 30.0 41.0 31 34.89883111533767 35.0 34.0 40.0 27.0 41.0 32 34.666915325144686 35.0 34.0 40.0 24.0 41.0 33 34.42475708344485 35.0 34.0 40.0 23.0 41.0 34 34.134948474546675 35.0 34.0 40.0 21.0 41.0 35 33.861349171549676 35.0 33.0 40.0 20.0 41.0 36 33.66102060069055 35.0 33.0 40.0 18.0 41.0 37 33.54740645411112 35.0 33.0 40.0 18.0 41.0 38 33.45416427024431 35.0 33.0 40.0 18.0 41.0 39 33.32428387307408 35.0 33.0 40.0 18.0 41.0 40 33.2666710324262 35.0 33.0 40.0 18.0 41.0 41 33.17649152378295 35.0 33.0 40.0 17.0 41.0 42 33.084136727996096 35.0 33.0 40.0 16.0 41.0 43 32.92289594117234 35.0 33.0 40.0 15.0 41.0 44 32.742322432221584 35.0 33.0 40.0 15.0 41.0 45 32.578965201100175 35.0 32.0 40.0 15.0 41.0 46 32.58762838654815 35.0 32.0 40.0 15.0 41.0 47 32.54175943905685 35.0 32.0 40.0 15.0 41.0 48 32.46566330123551 35.0 32.0 39.0 13.0 41.0 49 32.36352445869327 35.0 32.0 39.0 12.0 41.0 50 32.2551577652626 35.0 32.0 39.0 12.0 41.0 51 31.846135448638737 35.0 31.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 3.0 12 5.0 13 15.0 14 35.0 15 70.0 16 151.0 17 298.0 18 748.0 19 1395.0 20 2212.0 21 3693.0 22 5762.0 23 8941.0 24 14474.0 25 21733.0 26 27806.0 27 29305.0 28 28763.0 29 27968.0 30 29390.0 31 33753.0 32 40794.0 33 52823.0 34 87806.0 35 123056.0 36 118918.0 37 94974.0 38 119774.0 39 178917.0 40 70.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.361033128522266 17.868958880239624 24.909695213039576 32.860312778198534 2 34.19120508250336 19.20326786592183 27.846902303792326 18.75862474778248 3 20.805976155360298 20.64339906648672 40.56986449062026 17.980760287532718 4 21.26979065233938 23.704081225905277 38.06116618928036 16.964961932474985 5 19.22993696222859 29.868913324487924 35.96930301598058 14.931846697302909 6 75.51207512143455 1.932323134539422 21.276434199462063 1.279167544563965 7 72.153951866552 6.912041334252041 19.508016863220753 1.4259899359751873 8 71.02938915431442 3.8510744513853696 22.559682780115672 2.5598536141845427 9 39.498070524099944 21.096963519333674 28.387876855210536 11.017089101355854 10 28.836790825071606 24.459357625937926 36.28828818568524 10.415563363305221 11 26.36282878440171 22.00978689398987 39.111226265927904 12.516158055680519 12 20.1219755251724 27.131487186495757 38.09087233570033 14.655664952631508 13 14.612386988518052 30.176699371900074 38.164520800946036 17.046392838635832 14 14.069039741698889 24.606369832981226 45.031291106947826 16.293299318372064 15 16.411269733707652 22.195141858712635 44.967418146754056 16.42617026082566 16 17.51011242779888 23.369815897818448 38.01504099068575 21.105030683696928 17 18.595762935460787 23.488071036602147 41.85871263242013 16.057453395516934 18 21.86932332625321 25.563894788991455 37.038344655835786 15.52843722891955 19 21.769195580332823 25.797178200813548 37.341764943710174 15.091861275143453 20 17.660351500587478 28.106854811921185 38.39400790012661 15.838785787364731 21 18.306483912176102 25.32605580199952 37.70383826189622 18.66362202392816 22 15.445867428966245 28.61451671990995 37.82323229447238 18.116383556651424 23 14.787871540372835 25.923405596144466 44.212995917065754 15.075726946416946 24 15.790667524633323 26.354951435670532 42.34416611145594 15.5102149282402 25 14.955668559128519 30.552534323411667 38.029941517803756 16.461855599656054 26 15.256716151601948 30.503561890335916 38.30545890776289 15.934263050299244 27 15.142352233275819 28.86469372298686 41.04089198161825 14.952062062119065 28 14.485685054106945 26.872293940895208 41.25509892241666 17.386922082581187 29 15.675259620330772 30.259743710933567 39.084367353989066 14.980629314746588 30 20.3418769349331 28.6275190907072 35.94699967921159 15.083604295148124 31 19.414532664423046 28.249121628162566 36.591044118847364 15.745301588567026 32 18.698453192414206 30.487047930345256 35.30589738187299 15.50860149536755 33 16.437464290934216 29.999221755908483 35.86329098546582 17.70002296769148 34 16.56378659408117 29.780838871204402 35.97338405207022 17.68199048264421 35 20.50037298771703 30.098495331484532 33.408690139267726 15.992441541530711 36 17.93966520318814 32.02218185476447 34.29446478635301 15.743688155694374 37 16.84395446702618 32.76920127480179 33.478637199687945 16.908207058484095 38 17.519603209402707 32.458567992908485 33.22741621063461 16.794412587054193 39 19.426016510163677 30.070307710121156 32.731902503098745 17.771773276616422 40 16.356982462933754 29.366281530749184 34.6335704130578 19.64316559325927 41 17.162939636730844 29.71943351422763 32.83639600855689 20.28123084048464 42 17.324282923995924 28.745964045122975 34.30424029140496 19.625512739476147 43 16.68859037217151 30.660539418063237 34.385671197565806 18.265199012199453 44 15.5191362629478 35.11228543715489 32.08055016162801 17.288028138269297 45 17.861840794036752 32.471760179337814 33.17834886974282 16.48805015688262 46 17.004728307395027 31.69161793150313 32.29153023668111 19.01212352442073 47 16.533700816397033 30.944123972385622 34.60955873560011 17.91261647561723 48 17.897715948499222 29.208354924861478 34.70513090635066 18.188798220288636 49 17.3123245391751 32.07722838806667 32.86534289244856 17.745104180309664 50 16.102724423767196 31.597943917073344 33.40916467834792 18.890166980811536 51 16.287130310329577 29.20484333566807 35.26290414120765 19.245122212794712 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 579.0 1 6139.0 2 11699.0 3 49032.5 4 86366.0 5 51832.0 6 17298.0 7 17249.5 8 17201.0 9 19364.0 10 21527.0 11 23518.0 12 25509.0 13 24982.5 14 24456.0 15 21979.0 16 19502.0 17 17022.5 18 14543.0 19 13001.5 20 11460.0 21 10365.0 22 9270.0 23 8867.0 24 8464.0 25 8376.0 26 8801.0 27 9314.0 28 10021.5 29 10729.0 30 12810.5 31 14892.0 32 17381.0 33 19870.0 34 21875.0 35 23880.0 36 26700.0 37 29520.0 38 33139.5 39 36759.0 40 41949.0 41 47139.0 42 54244.5 43 61350.0 44 64707.0 45 68064.0 46 67935.0 47 67806.0 48 68947.5 49 70089.0 50 70476.5 51 70864.0 52 65624.5 53 60385.0 54 54631.5 55 48878.0 56 43353.0 57 37828.0 58 34624.5 59 31421.0 60 25702.5 61 19984.0 62 17415.0 63 14846.0 64 12548.5 65 10251.0 66 8548.5 67 6846.0 68 5923.0 69 5000.0 70 4358.5 71 3717.0 72 3495.5 73 3274.0 74 2730.5 75 1727.5 76 1268.0 77 959.5 78 651.0 79 503.5 80 356.0 81 274.5 82 193.0 83 120.5 84 48.0 85 42.5 86 37.0 87 29.5 88 22.0 89 17.5 90 13.0 91 8.0 92 3.0 93 3.5 94 4.0 95 3.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1053654.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.80490948120208 #Duplication Level Percentage of deduplicated Percentage of total 1 81.15604404723462 32.30408987152624 2 8.19777951174854 6.526237428240073 3 3.085128986493083 3.6840984013556968 4 1.5989266444687937 2.545805214006501 5 1.004349650538822 1.9989023463587374 6 0.6998057112617114 1.6713421794720396 7 0.5081783334877039 1.4159594795350328 8 0.39160159206532397 1.2470132739883877 9 0.30946412802142237 1.1086372443214667 >10 2.528233676340342 21.21919100822323 >50 0.4034701901658213 11.063881325756594 >100 0.11336073041937965 6.813593555129967 >500 0.002194078652644615 0.5417687504187821 >1k 9.751460678420509E-4 0.6259015655026232 >5k 2.4378651696051271E-4 0.6654934784832542 >10k+ 2.4378651696051271E-4 6.568084877681403 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 67685 6.423835528551118 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6858 0.650877802390538 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2842 0.2697280131807975 No Hit GCGAAGGGTCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCA 1251 0.11872967786389081 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1210 0.11483845740632125 No Hit GTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATT 1147 0.10885926499590948 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06833362754756306 0.0 2 0.0 0.0 0.0 0.20946154999648842 0.0 3 0.0 0.0 0.0 0.35656866485582556 0.0 4 0.0 0.0 0.0 0.45365936066298806 0.0 5 0.0 0.0 0.0 0.9980505934585737 0.0 6 0.0 0.0 0.0 1.2043801855257987 0.0 7 0.0 0.0 0.0 1.7171671155806365 0.0 8 0.0 0.0 0.0 2.2983825809990757 0.0 9 0.0 0.0 0.0 2.7927573947424866 0.0 10 0.0 0.0 0.0 3.0907679371026924 0.0 11 0.0 0.0 0.0 3.416586469562114 0.0 12 0.0 0.0 0.0 3.689446440672175 0.0 13 0.0 0.0 0.0 3.814345126578554 0.0 14 0.0 0.0 0.0 3.91456778031498 0.0 15 0.0 0.0 0.0 4.2109648898025345 0.0 16 0.0 0.0 0.0 4.576170165917844 0.0 17 0.0 0.0 0.0 5.012556304061865 0.0 18 0.0 0.0 0.0 5.248497134733034 0.0 19 0.0 0.0 0.0 5.533125675031841 0.0 20 0.0 0.0 0.0 5.855337710481809 0.0 21 0.0 0.0 0.0 6.193209535578093 0.0 22 0.0 0.0 0.0 6.526241062056425 0.0 23 0.0 0.0 0.0 6.807642736609931 0.0 24 3.796312641531281E-4 0.0 0.0 7.067025797842556 0.0 25 3.796312641531281E-4 0.0 0.0 7.313786119542089 0.0 26 3.796312641531281E-4 0.0 0.0 7.5851275655955375 0.0 27 3.796312641531281E-4 0.0 0.0 7.859316246130134 0.0 28 3.796312641531281E-4 0.0 0.0 8.143185523900636 0.0 29 4.745390801914101E-4 0.0 0.0 8.481342072445035 0.0 30 4.745390801914101E-4 0.0 0.0 8.797954546748743 0.0 31 4.745390801914101E-4 0.0 0.0 9.09036552796269 0.0 32 4.745390801914101E-4 0.0 0.0 9.393880723653115 0.0 33 4.745390801914101E-4 0.0 0.0 9.69967370692846 0.0 34 4.745390801914101E-4 0.0 0.0 10.043619632251195 0.0 35 4.745390801914101E-4 0.0 0.0 10.356815425177524 0.0 36 4.745390801914101E-4 0.0 0.0 10.668967232127434 0.0 37 4.745390801914101E-4 0.0 0.0 11.009401568256752 0.0 38 4.745390801914101E-4 0.0 0.0 11.349646088753993 0.0 39 4.745390801914101E-4 0.0 0.0 11.713048116364575 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCACGG 70 0.0 45.000004 1 CACGACG 225 0.0 45.000004 25 TACCCGA 25 3.8905833E-5 45.0 39 CGAACGT 20 7.0330204E-4 45.0 42 CTACTCG 25 3.8905833E-5 45.0 42 ACGTTCT 25 3.8905833E-5 45.0 43 GACGTTG 20 7.0330204E-4 45.0 27 CACATCG 25 3.8905833E-5 45.0 16 TTGTCGT 25 3.8905833E-5 45.0 16 GCACGGT 20 7.0330204E-4 45.0 21 TGACGTT 20 7.0330204E-4 45.0 41 CGTTATG 25 3.8905833E-5 45.0 42 AATTCGC 25 3.8905833E-5 45.0 12 GTATCGG 75 0.0 45.0 1 ACATCGC 25 3.8905833E-5 45.0 17 ATACGCC 20 7.0330204E-4 45.0 10 AATACGG 25 3.8905833E-5 45.0 1 AATACGC 20 7.0330204E-4 45.0 9 GCGTAAC 20 7.0330204E-4 45.0 15 CCGCAAT 20 7.0330204E-4 45.0 32 >>END_MODULE